RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 PSIP1O75475 530 aaKnown RBP10.35□□□□□ -0.75
CLIP4-204ENST00000404424 CTSOP43234 321 aaPredicted RBP10.35□□□□□ -0.75
CLIP4-204ENST00000404424 EIF2B2P49770 351 aaKnown RBP10.35□□□□□ -0.75
CLIP4-204ENST00000404424 STK19P49842 368 aaPredicted RBP10.35□□□□□ -0.75
CLIP4-204ENST00000404424 ZNF404Q494X3 552 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 SERPINA13PQ6UXR4 307 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 USP43Q70EL4 1123 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 FAM124AQ86V42 546 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 CADM3Q8N126 398 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 TET1Q8NFU7 2136 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 PXYLP1Q8TE99 480 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 MRPS31Q92665 395 aaKnown RBP10.35□□□□□ -0.75
CLIP4-204ENST00000404424 RPL3LQ92901 407 aaKnown RBP10.35□□□□□ -0.75
CLIP4-204ENST00000404424 UBE2FQ969M7 185 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 TIFAQ96CG3 184 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 FAM83CQ9BQN1 747 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 HERC2P3Q9BVR0 1158 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 ZDHHC6Q9H6R6 413 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 SP140LQ9H930 580 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 FKBP14Q9NWM8 211 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 CFAP97Q9P2B7 532 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 BTBD3Q9Y2F9 522 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 LYVE1Q9Y5Y7 322 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 CLCA1A8K7I4 914 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 E7EQ34 232 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 GRM6O15303 877 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 AQP9O43315 295 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 AIREO43918 545 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 BNIP3LO60238 219 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 RFPL2O75678 378 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 PARNO95453 639 aaKnown RBP10.35□□□□□ -0.75
CLIP4-204ENST00000404424 CKMP06732 381 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 ANXA4P09525 319 aaPredicted RBP10.35□□□□□ -0.75
CLIP4-204ENST00000404424 IDSP22304 550 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 MAPK9P45984 424 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 TMED10P49755 219 aaKnown RBP10.35□□□□□ -0.75
CLIP4-204ENST00000404424 CRYBA2P53672 197 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 DCDC1P59894 354 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 CDC20Q12834 499 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 FBXO43Q4G163 708 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 DEPDC4Q8N2C3 294 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 CDC26Q8NHZ8 85 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 CHTF18Q8WVB6 975 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 TMEM169Q96HH4 297 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 SGK2Q9HBY8 427 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 CPNE5Q9HCH3 593 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 SPASTQ9UBP0 616 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 SLC25A13Q9UJS0 675 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 POFUT2Q9Y2G5 429 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 UGT2A1Q9Y4X1 527 aa10.35□□□□□ -0.75
CLIP4-204ENST00000404424 MGAT4DA6NG13 374 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 ZBBXA8MT70 800 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 UPK3BL1B0FP48 263 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 TMEM229AB2RXF0 380 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 UPK3BL2E5RIL1 263 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 CXCL10P02778 98 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 CDK1P06493 297 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 NUDT7P0C024 238 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 CYP2A6P11509 494 aaPredicted RBP10.34□□□□□ -0.75
CLIP4-204ENST00000404424 LIPAP38571 399 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 EIF2DP41214 584 aaKnown RBP10.34□□□□□ -0.75
CLIP4-204ENST00000404424 CTSKP43235 329 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 PNLIPRP1P54315 467 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 RAE1P78406 368 aaKnown RBP10.34□□□□□ -0.75
CLIP4-204ENST00000404424 RBBP4Q09028 425 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 PPIGQ13427 754 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLIP4-204ENST00000404424 DDX39BQ13838 428 aaKnown RBP10.34□□□□□ -0.75
CLIP4-204ENST00000404424 ZNF181Q2M3W8 571 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 GPR153Q6NV75 609 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 AGTRAPQ6RW13 159 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 DPY19L3Q6ZPD9 716 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 DNAJC22Q8N4W6 341 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 C1orf52Q8N6N3 182 aaKnown RBP10.34□□□□□ -0.75
CLIP4-204ENST00000404424 AMER2Q8N7J2 671 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 DENND6BQ8NEG7 585 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 GOT1L1Q8NHS2 421 aaPredicted RBP10.34□□□□□ -0.75
CLIP4-204ENST00000404424 RAET1EQ8TD07 263 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 FEVQ99581 238 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 BHLHE41Q9C0J9 482 aaPredicted RBP10.34□□□□□ -0.75
CLIP4-204ENST00000404424 FAM83DQ9H4H8 585 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 NDUFAF4Q9P032 175 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 CD84Q9UIB8 345 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 METTL15A6NJ78 407 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 ARHGEF33A8MVX0 844 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 M0R082 166 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 SGTAO43765 313 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 KDM1AO60341 852 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 UPK1BO75841 260 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 CATP04040 527 aaKnown RBP10.34□□□□□ -0.75
CLIP4-204ENST00000404424 RPLP0P05388 317 aaKnown RBP10.34□□□□□ -0.75
CLIP4-204ENST00000404424 URODP06132 367 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 SRPRAP08240 638 aaKnown RBP10.34□□□□□ -0.75
CLIP4-204ENST00000404424 ITGA2P17301 1181 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 GABRR2P28476 465 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 HLA-FP30511 346 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 CYP4F8P98187 520 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 NAE1Q13564 534 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 DNASE1L3Q13609 305 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 E2F2Q14209 437 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 EIF4HQ15056 248 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms