RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 EZRP15311 586 aaKnown RBP11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ADRA1DP25100 572 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CTNNA2P26232 953 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ARNTP27540 789 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TRHRP34981 398 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 RPA3P35244 121 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CCNFP41002 786 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 MAGEA1P43355 309 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 MLF1P58340 268 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PPP2R2AP63151 447 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TAP2Q03519 686 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 RELAQ04206 551 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 MYBPHQ13203 477 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TSTA3Q13630 321 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PTK6Q13882 451 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ABRAXAS2Q15018 415 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TMED2Q15363 201 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 EXT1Q16394 746 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TYSND1Q2T9J0 566 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CES4AQ5XG92 561 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PTRHD1Q6GMV3 140 aaKnown RBP11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TMEM214Q6NUQ4 689 aaKnown RBP11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 MDGA2Q7Z553 956 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PCGF5Q86SE9 256 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 KRTAP1-3Q8IUG1 177 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 LGI4Q8N135 537 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 KCT2Q8NC54 265 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CHDHQ8NE62 594 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 WFDC11Q8NEX6 87 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 C16orf52Q8NHV5 167 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 SLC35B2Q8TB61 432 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 RND1Q92730 232 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 RERGQ96A58 199 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PWWP2AQ96N64 755 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PRAP1Q96NZ9 151 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 GPATCH1Q9BRR8 931 aaKnown RBP11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ETNK1Q9HBU6 452 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CHRAC1Q9NRG0 131 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 DEPPQ9NTK1 212 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CATSPERZQ9NTU4 200 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 C19orf25Q9UFG5 118 aaPredicted RBP11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 DUSP10Q9Y6W6 482 aa11.14□□□□□ -0.63
SPTLC1P3-201ENST00000403408 FEZF1A0PJY2 475 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CD3EAPO15446 510 aaKnown RBP11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 LCMT2O60294 686 aaKnown RBP11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PSIP1O75475 530 aaKnown RBP11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ZWINTO95229 277 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 SLC16A8O95907 504 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CYC1P08574 325 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 FOSL1P15407 271 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 RPS3P23396 243 aaKnown RBP eCLIP11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 COILP38432 576 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ADH7P40394 386 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 AVPR1BP47901 424 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PNLIPRP1P54315 467 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 GPR85P60893 370 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CRADDP78560 199 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CDH17Q12864 832 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 KLF1Q13351 362 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TMEM198Q66K66 360 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 RTL6Q6ICC9 239 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 OTOAQ7RTW8 1153 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 VSTM4Q8IW00 320 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ZZZ3Q8IYH5 903 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 SLC5A8Q8N695 610 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 FAM98AQ8NCA5 519 aaKnown RBP11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 NFAM1Q8NET5 270 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ZCCHC10Q8TBK6 192 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TM4SF19Q96DZ7 209 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ARSGQ96EG1 525 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PEX11GQ96HA9 241 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 GBP4Q96PP9 640 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 FERMT1Q9BQL6 677 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TSSK1BQ9BXA7 367 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 OCEL1Q9H607 264 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PNPLA3Q9NST1 481 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TREX1Q9NSU2 369 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ABCF3Q9NUQ8 709 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 FAM215AQ9Y5M1 114 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 HIVEP2P31629 2446 aa11.13□□□□□ -0.63
SPTLC1P3-201ENST00000403408 A0A0G2JMM0 328 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 A0A1W2PPB8 328 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 A0A1W2PRS3 328 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 SYCE3A1L190 88 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 KIR3DP1A8MWS1 328 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TFECO14948 347 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PEX1O43933 1283 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ETS1P14921 441 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 FMO4P31512 558 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 CYB561P49447 251 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 AGTR2P50052 363 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 HLCSP50747 726 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 EIF3BP55884 814 aaKnown RBP11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 PRAMEP78395 509 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 NSDHLQ15738 373 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 KCTD19Q17RG1 926 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 SKOR2Q2VWA4 1001 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 KLHL38Q2WGJ6 581 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 ANKRD20A4Q4UJ75 823 aa11.12□□□□□ -0.63
SPTLC1P3-201ENST00000403408 TMEM211Q6ICI0 200 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms