RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 MDC1Q14676 2089 aaKnown RBP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 TRIOBPQ9H2D6 2365 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 ARNTLO00327 626 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 CLDN8P56748 225 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 NR1D2Q14995 579 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 FAM43BQ6ZT52 329 aaPredicted RBP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 GPR149Q86SP6 731 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 ZZZ3Q8IYH5 903 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 NFKBIDQ8NI38 313 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 VANGL1Q8TAA9 524 aaPredicted RBP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 TRMT2BQ96GJ1 504 aaKnown RBP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 PDLIM5Q96HC4 596 aaKnown RBP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 FEVQ99581 238 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 SLC12A9Q9BXP2 914 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 KLHL25Q9H0H3 589 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 FZD3Q9NPG1 666 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 KIF17Q9P2E2 1029 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 VPS29Q9UBQ0 182 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 ZNF639Q9UID6 485 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 RIMKLBQ9ULI2 386 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 C16orf96A6NNT2 1141 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 PCDH17O14917 1159 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 HOXB8P17481 243 aaPredicted RBP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 CCNA2P20248 432 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 RECQLP46063 649 aaPredicted RBP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 SLC6A12P48065 614 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 SLBPQ14493 270 aaKnown RBP eCLIP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 NPTX1Q15818 432 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 SLC5A12Q1EHB4 618 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 TTLL9Q3SXZ7 439 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 RAET1GQ6H3X3 334 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 ZNF773Q6PK81 442 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 RNF130Q86XS8 419 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 EID3Q8N140 333 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 TMEM159Q96B96 161 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 IL4I1Q96RQ9 567 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 NODALQ96S42 347 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 CDK5RAP1Q96SZ6 601 aaKnown RBP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 MARCH7Q9H992 704 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 CD93Q9NPY3 652 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 THUMPD1Q9NXG2 353 aaKnown RBP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 DNMT3AQ9Y6K1 912 aaPredicted RBP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 SYNDIG1LA6NDD5 238 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 IL6P05231 212 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 CALRP27797 417 aaKnown RBP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 MAT2AP31153 395 aaKnown RBP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 KDELR2P33947 212 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 TAS2R50P59544 299 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 FOXM1Q08050 763 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 DUSP7Q16829 419 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 HTR3DQ70Z44 454 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 POF1BQ8WVV4 589 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 ZNF689Q96CS4 500 aaPredicted RBP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 ECHDC3Q96DC8 303 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 PLEKHA8Q96JA3 519 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 LMLNQ96KR4 655 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 TSEN34Q9BSV6 310 aaKnown RBP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 SYNPO2LQ9H987 977 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 TRNAU1APQ9NX07 287 aaKnown RBP11.3□□□□□ -0.6
ITSN1-211ENST00000399355 TBX21Q9UL17 535 aa11.3□□□□□ -0.6
ITSN1-211ENST00000399355 GRM6O15303 877 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 SPINT1O43278 529 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 FKTNO75072 461 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 LINC00271P0C7V0 271 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 GTF2IRD2BQ6EKJ0 949 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 GTF2IRD2Q86UP8 949 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 IGFN1Q86VF2 1251 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 COMTD1Q86VU5 262 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 HORMAD1Q86X24 394 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 APLFQ8IW19 511 aaPredicted RBP11.29□□□□□ -0.6
ITSN1-211ENST00000399355 TMEM132CQ8N3T6 1108 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 OR8J3Q8NGG0 315 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 C2orf15Q8WU43 125 aaKnown RBP11.29□□□□□ -0.6
ITSN1-211ENST00000399355 FAR1Q8WVX9 515 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 FKBP10Q96AY3 582 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 ARMC5Q96C12 935 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 SLAMF7Q9NQ25 335 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 SPHK2Q9NRA0 654 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 IL20RAQ9UHF4 553 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 MOSPD1Q9UJG1 213 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 STOML2Q9UJZ1 356 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 RAB23Q9ULC3 237 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 GMPPBQ9Y5P6 360 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 RTTNQ86VV8 2226 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 MED12Q93074 2177 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 SLC28A1O00337 649 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 NPC1O15118 1278 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 TNRC18O15417 2968 aaPredicted RBP11.29□□□□□ -0.6
ITSN1-211ENST00000399355 FRS3O43559 492 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 CXCL10P02778 98 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 HOXC5Q00444 222 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 HSPB3Q12988 150 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 CAMK1Q14012 370 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 ADGRD2Q7Z7M1 963 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 TTC29Q8NA56 475 aaPredicted RBP11.29□□□□□ -0.6
ITSN1-211ENST00000399355 SLAIN1Q8ND83 568 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 SIMC1Q8NDZ2 872 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 ZNF555Q8NEP9 628 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 ABHD11Q8NFV4 315 aa11.29□□□□□ -0.6
ITSN1-211ENST00000399355 OR5D16Q8NGK9 328 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms