RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 COL6A6A6NMZ7 2263 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SUPT3HB4E1H0 165 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ZNF500O60304 480 aaPredicted RBP13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PRAMEF4O60810 478 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 KERAO60938 352 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SUPT3HO75486 399 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 RFPL1O75677 317 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 STK16O75716 305 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 KLHL2O95198 593 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ZGLP1P0C6A0 271 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SLC35G6P0C7Q6 338 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MTHFD2P13995 350 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 GNAZP19086 355 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 NR1D1P20393 614 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 GCAP28676 217 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SCTRP47872 440 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 AGTR2P50052 363 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 REEP5Q00765 189 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 OCA2Q04671 838 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 KLC1Q07866 573 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CDC16Q13042 620 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SLC29A2Q14542 456 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 RBBP5Q15291 538 aaKnown RBP13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 NDUFA9Q16795 377 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 FAM83EQ2M2I3 478 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CDKL4Q5MAI5 379 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PRAMEF9Q5VWM5 478 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SLCO4C1Q6ZQN7 724 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PPP1R32Q7Z5V6 425 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 KLHDC8AQ8IYD2 350 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TCAIMQ8N3R3 496 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 GPR78Q96P69 363 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 EPB41L4BQ9H329 900 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CNOT10Q9H9A5 744 aaKnown RBP13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ACSS2Q9NR19 701 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 DNAJC11Q9NVH1 559 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TUBD1Q9UJT1 453 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CDC14AQ9UNH5 594 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MAP4K5Q9Y4K4 846 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SPTA1P02549 2419 aa13.38□□□□□ -0.27
HLA-DQB1-202ENST00000399079 IGLV3-12A0A075B6K2 115 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TRIM49D1C9J1S8 452 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CCNT2O60583 730 aaKnown RBP13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 KRT38O76015 456 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 B3GALT4O96024 378 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 S100BP04271 92 aaPredicted RBP13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ABHD2P08910 425 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 C1GALT1C1LP0DN25 315 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SFTPCP11686 197 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MAGEA12P43365 314 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SERPINB9P50453 376 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 C19orf57Q0VDD7 668 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ACAP2Q15057 778 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CCDC91Q7Z6B0 441 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PTRH1Q86Y79 214 aaKnown RBP13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PDSS2Q86YH6 399 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SNX31Q8N9S9 440 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 C9orf43Q8TAL5 461 aaPredicted RBP13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ISL2Q96A47 359 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MIEF2Q96C03 454 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 AIF1LQ9BQI0 150 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 P4HTMQ9NXG6 502 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ZFP69BQ9UJL9 534 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ZNF180Q9UJW8 692 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TP53TG5Q9Y2B4 290 aa13.37□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ZNF462Q96JM2 2506 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 A6NL46 340 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MKRN2OSH3BPM6 223 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SGK494L7N484 410 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MAP2K7O14733 419 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ALOX12BO75342 701 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 IPO13O94829 963 aaKnown RBP13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 NSA2O95478 260 aaKnown RBP13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PDGFAP04085 211 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 EPORP19235 508 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MMP11P24347 488 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 HNF4AP41235 474 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 AVPR1BP47901 424 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PWP1Q13610 501 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 RAPSNQ13702 412 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SLBPQ14493 270 aaKnown RBP eCLIP13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ATG9BQ674R7 924 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 MED25Q71SY5 747 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TBC1D19Q8N5T2 526 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 TMEM102Q8N9M5 508 aaPredicted RBP13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 RHEBL1Q8TAI7 183 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CRB3Q9BUF7 120 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 CD244Q9BZW8 370 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ANKZF1Q9H8Y5 726 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SCN3AQ9NY46 2000 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 NUDT4Q9NZJ9 180 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 NXT1Q9UKK6 140 aaKnown RBP13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 NAALAD2Q9Y3Q0 740 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 HS3ST3B1Q9Y662 390 aa13.36□□□□□ -0.27
HLA-DQB1-202ENST00000399079 ZNF860A6NHJ4 632 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 LRRC14BA6NHZ5 514 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 AGPSO00116 658 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PEX12O00623 359 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 SOCS6O14544 535 aa13.35□□□□□ -0.27
HLA-DQB1-202ENST00000399079 PRPF4O43172 522 aaKnown RBP eCLIP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms