RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 ACPTQ9BZG2 426 aa10.76□□□□□ -0.69
CSGALNACT1-202ENST00000397998 PTGFRNQ9P2B2 879 aa10.76□□□□□ -0.69
CSGALNACT1-202ENST00000397998 MTMR11A4FU01 709 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 APOL3O95236 402 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 LAMP1P11279 417 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 SDC1P18827 310 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CCT3P49368 545 aaKnown RBP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 POLR2LP62875 67 aaKnown RBP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CDK6Q00534 326 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 TARDBPQ13148 414 aaKnown RBP eCLIP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 SOWAHCQ53LP3 525 aaPredicted RBP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CATSPEREQ5SY80 951 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CYP4Z2PQ8N1L4 340 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CELF2-AS1Q8N7Q2 184 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 BEND7Q8N7W2 519 aaPredicted RBP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 ARL14EPQ8N8R7 260 aaPredicted RBP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 OR8H1Q8NGG4 311 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 GRPEL2Q8TAA5 225 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 AP3S1Q92572 193 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 HTATIP2Q9BUP3 242 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 IL17CQ9P0M4 197 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 BOLA1Q9Y3E2 137 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 TLR4O00206 839 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 KPNA3O00505 521 aaPredicted RBP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 MPZL2O60487 215 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 ITGAMP11215 1152 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 PAICSP22234 425 aaKnown RBP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 LIPAP38571 399 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 BUD31P41223 144 aaPredicted RBP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CDKN2CP42773 168 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CLK3P49761 638 aaKnown RBP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 ST8SIA6P61647 398 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 LCN1P1Q5VSP4 162 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 LRRC70Q7Z2Q7 622 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 NXPE1Q8N323 547 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 SLC39A13Q96H72 371 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 DOHHQ9BU89 302 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 OR2B2Q9GZK3 357 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CLMPQ9H6B4 373 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 TBC1D17Q9HA65 648 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 ZDHHC3Q9NYG2 299 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 GULP1Q9UBP9 304 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 PRKAB1Q9Y478 270 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 MYADML2A6NDP7 307 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 SLC16A6O15403 523 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 SERPINI2O75830 405 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CCNYL3P0C7X3 344 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 HMGCLP35914 325 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CXCR4P61073 352 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CTF1Q16619 201 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 RNASE12Q5GAN4 147 aaKnown RBP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 DEFB128Q7Z7B8 93 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 LYSMD2Q8IV50 215 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 OR9Q2Q8NGE9 314 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 KLHL6Q8WZ60 621 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 DNASE1L2Q92874 299 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 VMP1Q96GC9 406 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 TEFMQ96QE5 360 aaKnown RBP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CCM2Q9BSQ5 444 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CARS2Q9HA77 564 aaKnown RBP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 STARD7Q9NQZ5 370 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 ZNF225Q9UK10 706 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 RIMKLBQ9ULI2 386 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 A0A1W2PQ72 361 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 BTN3A3O00478 584 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 SLC30A4O14863 429 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 PTX3P26022 381 aaPredicted RBP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 EPHA2P29317 976 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 GJA5P36382 358 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 SLC35A2P78381 396 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 SYT6Q5T7P8 510 aaPredicted RBP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 LIPKQ5VXJ0 399 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CACTIN-AS1Q8N1I8 211 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 MAGEB10Q96LZ2 347 aaPredicted RBP10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CCDC115Q96NT0 180 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 MCMBPQ9BTE3 642 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 ANKRA2Q9H9E1 313 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 SMURF1Q9HCE7 757 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 ACSL6Q9UKU0 697 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CLEC4AQ9UMR7 237 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 CLCA2Q9UQC9 943 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 HCN4Q9Y3Q4 1203 aa10.75□□□□□ -0.69
CSGALNACT1-202ENST00000397998 M0QZQ0 153 aa10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 NME6O75414 186 aaPredicted RBP10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 UGT2B17O75795 530 aa10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 C6orf47O95873 294 aa10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 LRG1P02750 347 aa10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 ETFAP13804 333 aa10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 BNC1Q01954 994 aa10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 RING1Q06587 406 aa10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 BCL7AQ4VC05 210 aa10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 SETMARQ53H47 684 aaPredicted RBP10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 GTF2IRD2BQ6EKJ0 949 aa10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 MED27Q6P2C8 311 aa10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 GTF2IRD2Q86UP8 949 aa10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 TEX26Q8N6G2 289 aa10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 TCEANCQ8N8B7 351 aa10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 FBXO22Q8NEZ5 403 aa10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 FLCNQ8NFG4 579 aa10.74□□□□□ -0.69
CSGALNACT1-202ENST00000397998 TANKQ92844 425 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms