RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 MTO1Q9Y2Z2 717 aaKnown RBP13.87□□□□□ -0.19
SEC13-208ENST00000397109 PCDHGB7Q9Y5F8 929 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 HELZ2Q9BYK8 2649 aaKnown RBP13.87□□□□□ -0.19
SEC13-208ENST00000397109 BAHCC1Q9P281 2608 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 TM9SF1O15321 606 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 DNAJB5O75953 348 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 ZWINTO95229 277 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 GUCA1CO95843 209 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 ANXA5P08758 320 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 SNRPAP09012 282 aaKnown RBP13.87□□□□□ -0.19
SEC13-208ENST00000397109 NPPBP16860 134 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 CSRP3P50461 194 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 CSNK1G2P78368 415 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 CDKL1Q00532 357 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 OCA2Q04671 838 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 CHAF1BQ13112 559 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 ATP1A4Q13733 1029 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 FAM53BQ14153 422 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 ZNF460Q14592 562 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 USP10Q14694 798 aaKnown RBP13.87□□□□□ -0.19
SEC13-208ENST00000397109 ZKSCAN8Q15776 578 aaPredicted RBP13.87□□□□□ -0.19
SEC13-208ENST00000397109 CPZQ66K79 652 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 PTRH1Q86Y79 214 aaKnown RBP13.87□□□□□ -0.19
SEC13-208ENST00000397109 CEP97Q8IW35 865 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.87□□□□□ -0.19
SEC13-208ENST00000397109 ISL2Q96A47 359 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 DERL2Q9GZP9 239 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 KCNK9Q9NPC2 374 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 ZNF282Q9UDV7 671 aaPredicted RBP13.87□□□□□ -0.19
SEC13-208ENST00000397109 MAU2Q9Y6X3 613 aa13.87□□□□□ -0.19
SEC13-208ENST00000397109 VSTM2BA6NLU5 285 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 J3QKU1 62 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 CDC7O00311 574 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 EBAG9O00559 213 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 KLHL41O60662 606 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 CEACAM4O75871 244 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 WISP3O95389 354 aaPredicted RBP13.86□□□□□ -0.19
SEC13-208ENST00000397109 UMODP07911 640 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 STMN1P16949 149 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 FBLP22087 321 aaKnown RBP13.86□□□□□ -0.19
SEC13-208ENST00000397109 MMP11P24347 488 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 HNMTP50135 292 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 PGDP52209 483 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 PPP1R3AQ16821 1122 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 HKDC1Q2TB90 917 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 ASB18Q6ZVZ8 466 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 PLD3Q8IV08 490 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 TBC1D19Q8N5T2 526 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 METTL27Q8N6F8 245 aaPredicted RBP13.86□□□□□ -0.19
SEC13-208ENST00000397109 CAMKVQ8NCB2 501 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 ABHD11Q8NFV4 315 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 MZB1Q8WU39 189 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 DYDC1Q8WWB3 177 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 CKAP2Q8WWK9 683 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 ZNF317Q96PQ6 595 aaPredicted RBP13.86□□□□□ -0.19
SEC13-208ENST00000397109 SPSB2Q99619 263 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 DRC3Q9H069 523 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 NSRP1Q9H0G5 558 aaKnown RBP13.86□□□□□ -0.19
SEC13-208ENST00000397109 SEMA3GQ9NS98 782 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 OARD1Q9Y530 152 aa13.86□□□□□ -0.19
SEC13-208ENST00000397109 NPEPPSL1A6NEC2 478 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 TYROBPO43914 113 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 MED26O95402 600 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 CDH1P12830 882 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 MAGEA12P43365 314 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 CCR8P51685 355 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 SLC18A2Q05940 514 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 KLRB1Q12918 225 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 DSG2Q14126 1118 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 TTC19Q6DKK2 380 aaPredicted RBP13.85□□□□□ -0.19
SEC13-208ENST00000397109 TIFABQ6ZNK6 161 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 RGS9BPQ6ZS82 235 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 FRA10AC1Q70Z53 315 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 PPP1R32Q7Z5V6 425 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 TEX19Q8NA77 164 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 CLEC1AQ8NC01 280 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 STT3BQ8TCJ2 826 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 ANKRD49Q8WVL7 239 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 MIEF2Q96C03 454 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 PYCR2Q96C36 320 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 MAGEB18Q96M61 343 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 EGFL8Q99944 293 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 FAM107BQ9H098 131 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 MLXIPLQ9NP71 852 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 P4HTMQ9NXG6 502 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 CTSFQ9UBX1 484 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 IKZF3Q9UKT9 509 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 ZNF451Q9Y4E5 1061 aa13.85□□□□□ -0.19
SEC13-208ENST00000397109 IGLV3-12A0A075B6K2 115 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 ALDOAP04075 364 aaKnown RBP13.84□□□□□ -0.19
SEC13-208ENST00000397109 ZGLP1P0C6A0 271 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 KRT4P19013 534 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 AVPR1BP47901 424 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 RAB10P61026 200 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 ATP6V0D1P61421 351 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 CSHL1Q14406 222 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 TSNQ15631 228 aaKnown RBP13.84□□□□□ -0.19
SEC13-208ENST00000397109 ZXDCQ2QGD7 858 aaPredicted RBP13.84□□□□□ -0.19
SEC13-208ENST00000397109 DCAF10Q5QP82 559 aa13.84□□□□□ -0.19
SEC13-208ENST00000397109 CCDC91Q7Z6B0 441 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms