RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 SYNPOQ8N3V7 929 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.9■□□□□ 0.46
SIL1-202ENST00000394817 AMBRA1Q9C0C7 1298 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 DDX18Q9NVP1 670 aaKnown RBP17.9■□□□□ 0.46
SIL1-202ENST00000394817 GDE1Q9NZC3 331 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 ATP6V1HQ9UI12 483 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 C3orf18Q9UK00 162 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 NUMA1Q14980 2115 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 ZNF701M0R085 212 aaPredicted RBP17.9■□□□□ 0.46
SIL1-202ENST00000394817 RNASET2O00584 256 aaKnown RBP17.9■□□□□ 0.46
SIL1-202ENST00000394817 TRMUO75648 421 aaKnown RBP17.9■□□□□ 0.46
SIL1-202ENST00000394817 KDELR2P33947 212 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 OPRD1P41143 372 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 TSTA3Q13630 321 aaPredicted RBP17.9■□□□□ 0.46
SIL1-202ENST00000394817 ANKRD54Q6NXT1 300 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 SHQ1Q6PI26 577 aaKnown RBP17.9■□□□□ 0.46
SIL1-202ENST00000394817 NXPE4Q6UWF7 544 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 VITQ6UXI7 678 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 FAM83HQ6ZRV2 1179 aaPredicted RBP17.9■□□□□ 0.46
SIL1-202ENST00000394817 PDZD3Q86UT5 571 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 ZNF555Q8NEP9 628 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 OR10Q1Q8NGQ4 319 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 SH3GL3Q99963 347 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 BHLHE41Q9C0J9 482 aaPredicted RBP17.9■□□□□ 0.46
SIL1-202ENST00000394817 GABARAPL1Q9H0R8 117 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 ING2Q9H160 280 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 PRSS16Q9NQE7 514 aa17.9■□□□□ 0.46
SIL1-202ENST00000394817 EXO1Q9UQ84 846 aaKnown RBP17.9■□□□□ 0.46
SIL1-202ENST00000394817 TBC1D3BA6NDS4 549 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 ELK4P28324 431 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 TTKP33981 857 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 PIGAP37287 484 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 CNTN1Q12860 1018 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 RPA4Q13156 261 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 KCNAB2Q13303 367 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 GAB1Q13480 694 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 SPIDRQ14159 915 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 HIST2H2ACQ16777 129 aaPredicted RBP17.89■□□□□ 0.45
SIL1-202ENST00000394817 RFX4Q33E94 735 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 TMEM259Q4ZIN3 620 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 PIP5KL1Q5T9C9 394 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 HIST2H2AA3Q6FI13 130 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 ARMCX6Q7L4S7 300 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 COMMD6Q7Z4G1 85 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 PLA2G15Q8NCC3 412 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 ZFP90Q8TF47 636 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 SNX19Q92543 992 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 PLA2G2FQ9BZM2 168 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 PRM3Q9NNZ6 103 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 VNN3Q9NY84 501 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 THAP10Q9P2Z0 257 aaPredicted RBP17.89■□□□□ 0.45
SIL1-202ENST00000394817 TMEFF2Q9UIK5 374 aaPredicted RBP17.89■□□□□ 0.45
SIL1-202ENST00000394817 TSC22D4Q9Y3Q8 395 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 PCYT1BQ9Y5K3 369 aaPredicted RBP17.89■□□□□ 0.45
SIL1-202ENST00000394817 AP1M2Q9Y6Q5 423 aa17.89■□□□□ 0.45
SIL1-202ENST00000394817 SPTBN5Q9NRC6 3674 aaKnown RBP17.88■□□□□ 0.45
SIL1-202ENST00000394817 PI15O43692 258 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 ABCB1P08183 1280 aaPredicted RBP17.88■□□□□ 0.45
SIL1-202ENST00000394817 EFNA1P20827 205 aaPredicted RBP17.88■□□□□ 0.45
SIL1-202ENST00000394817 PPP1R8Q12972 351 aaKnown RBP17.88■□□□□ 0.45
SIL1-202ENST00000394817 ZC3H12BQ5HYM0 836 aaKnown RBP17.88■□□□□ 0.45
SIL1-202ENST00000394817 RBM48Q5RL73 367 aaKnown RBP17.88■□□□□ 0.45
SIL1-202ENST00000394817 ZNF773Q6PK81 442 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 CBLL1Q75N03 491 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 EIF3MQ7L2H7 374 aaKnown RBP17.88■□□□□ 0.45
SIL1-202ENST00000394817 ERI1Q8IV48 349 aaKnown RBP17.88■□□□□ 0.45
SIL1-202ENST00000394817 ARL10Q8N8L6 244 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 LMNTD1Q8N9Z9 388 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 SETD7Q8WTS6 366 aaKnown RBP17.88■□□□□ 0.45
SIL1-202ENST00000394817 DPH2Q9BQC3 489 aaPredicted RBP17.88■□□□□ 0.45
SIL1-202ENST00000394817 SPNS1Q9H2V7 528 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 REEP4Q9H6H4 257 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 TM9SF3Q9HD45 589 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 ZNF282Q9UDV7 671 aaPredicted RBP17.88■□□□□ 0.45
SIL1-202ENST00000394817 HCN2Q9UL51 889 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 VPS4AQ9UN37 437 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 ABCG2Q9UNQ0 655 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 HS6ST1O60243 411 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 CPNE6O95741 557 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 EPHX1P07099 455 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 PIK3CBP42338 1070 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 YAP1P46937 504 aaKnown RBP17.88■□□□□ 0.45
SIL1-202ENST00000394817 RAD23AP54725 363 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 ZNF385BQ569K4 471 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 PRAMEF14Q5SWL7 426 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 PRAMEF13Q5VWM6 474 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 ANKRD34AQ69YU3 496 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 OR2T5Q6IEZ7 315 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 TMEM184AQ6ZMB5 413 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 DCUN1D3Q8IWE4 304 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 OR2T29Q8NH02 315 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 GOT1L1Q8NHS2 421 aaPredicted RBP17.88■□□□□ 0.45
SIL1-202ENST00000394817 HDAC2Q92769 488 aaKnown RBP17.88■□□□□ 0.45
SIL1-202ENST00000394817 RAD51AP1Q96B01 352 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 MYADMQ96S97 322 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 CDH7Q9ULB5 785 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 FZD4Q9ULV1 537 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 ASF1AQ9Y294 204 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 U3KQV3 271 aa17.88■□□□□ 0.45
SIL1-202ENST00000394817 ANTXRLA6NF34 631 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms