RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ZNF221Q9UK13 617 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 SSR3Q9UNL2 185 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 TRAV19A0A0A6YYK7 116 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 FAM25AB3EWG3 89 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 FAM25CB3EWG5 89 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 FAM25GB3EWG6 89 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 SLC28A2O43868 658 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 TLL1O43897 1013 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 SERPINB7O75635 380 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 POP4O95707 220 aaKnown RBP15.59■□□□□ 0.09
PCDH1-203ENST00000394536 CPNE6O95741 557 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 GSTT2P0CG29 244 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 GSTT2BP0CG30 244 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 OR2B6P58173 313 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 CDK6Q00534 326 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 TRIQKQ629K1 86 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 C8orf82Q6P1X6 216 aaPredicted RBP15.59■□□□□ 0.09
PCDH1-203ENST00000394536 CD300LGQ6UXG3 332 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 RAB8BQ92930 207 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 ZNF558Q96NG5 402 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 TEX12Q9BXU0 123 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 TRBC2A0A5B9 178 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 BUD31P41223 144 aaPredicted RBP15.59■□□□□ 0.09
PCDH1-203ENST00000394536 SP3Q02447 781 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 LMAN2Q12907 356 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 MRPL28Q13084 256 aaKnown RBP15.59■□□□□ 0.09
PCDH1-203ENST00000394536 PPIGQ13427 754 aaKnown RBP eCLIP15.59■□□□□ 0.09
PCDH1-203ENST00000394536 SLBPQ14493 270 aaKnown RBP eCLIP15.59■□□□□ 0.09
PCDH1-203ENST00000394536 IQCCQ4KMZ1 466 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 ZNF57Q68EA5 555 aaPredicted RBP15.59■□□□□ 0.09
PCDH1-203ENST00000394536 XAF1Q6GPH4 301 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 TMCO2Q7Z6W1 182 aaPredicted RBP15.59■□□□□ 0.09
PCDH1-203ENST00000394536 RNF130Q86XS8 419 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 FCGR1BQ92637 280 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 P2RY13Q9BPV8 354 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 MAGIXQ9H6Y5 334 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 SEC14L3Q9UDX4 400 aa15.59■□□□□ 0.09
PCDH1-203ENST00000394536 HTR3EA5X5Y0 456 aa15.58■□□□□ 0.09
PCDH1-203ENST00000394536 SLC15A1P46059 708 aa15.58■□□□□ 0.09
PCDH1-203ENST00000394536 HNMTP50135 292 aa15.58■□□□□ 0.09
PCDH1-203ENST00000394536 RPS26P62854 115 aaKnown RBP15.58■□□□□ 0.09
PCDH1-203ENST00000394536 EXOC3L2Q2M3D2 409 aa15.58■□□□□ 0.09
PCDH1-203ENST00000394536 C17orf99Q6UX52 265 aa15.58■□□□□ 0.09
PCDH1-203ENST00000394536 CADM3Q8N126 398 aa15.58■□□□□ 0.09
PCDH1-203ENST00000394536 CYB5D2Q8WUJ1 264 aa15.58■□□□□ 0.09
PCDH1-203ENST00000394536 PKMYT1Q99640 499 aa15.58■□□□□ 0.09
PCDH1-203ENST00000394536 MMP27Q9H306 513 aa15.58■□□□□ 0.09
PCDH1-203ENST00000394536 FAM120CQ9NX05 1096 aaKnown RBP15.58■□□□□ 0.09
PCDH1-203ENST00000394536 AHSPQ9NZD4 102 aa15.58■□□□□ 0.09
PCDH1-203ENST00000394536 ENOPH1Q9UHY7 261 aa15.58■□□□□ 0.09
PCDH1-203ENST00000394536 A0A1W2PRB8 838 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 PLK4O00444 970 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 ZW10O43264 779 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 CSF2P04141 144 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 PPP2R1BP30154 601 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 FEN1P39748 380 aaKnown RBP15.58■□□□□ 0.08
PCDH1-203ENST00000394536 GPR1P46091 355 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 TAS2R50P59544 299 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 ERAP2Q6P179 960 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 CRTC1Q6UUV9 634 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 CPPED1Q9BRF8 314 aaPredicted RBP15.58■□□□□ 0.08
PCDH1-203ENST00000394536 POU2F3Q9UKI9 436 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 TMED5Q9Y3A6 229 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 CEP350Q5VT06 3117 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 ARID1BQ8NFD5 2236 aaPredicted RBP15.58■□□□□ 0.08
PCDH1-203ENST00000394536 ATG13O75143 517 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 CYBAP13498 195 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 CD70P32970 193 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 UGT2B15P54855 530 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 C10orf62Q5T681 223 aaPredicted RBP15.58■□□□□ 0.08
PCDH1-203ENST00000394536 PRSS48Q7RTY5 328 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 OTUB1Q96FW1 271 aaPredicted RBP15.58■□□□□ 0.08
PCDH1-203ENST00000394536 ART5Q96L15 291 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 BBS4Q96RK4 519 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 BEX2Q9BXY8 128 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 SEMA3GQ9NS98 782 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 LYVE1Q9Y5Y7 322 aa15.58■□□□□ 0.08
PCDH1-203ENST00000394536 CCDC182A6NF36 153 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 E7EQ34 232 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 INPPL1O15357 1258 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 ADAM23O75077 832 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 HOXD12P35452 270 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 CSRP3P50461 194 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 MLLT10P55197 1068 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.57■□□□□ 0.08
PCDH1-203ENST00000394536 DSC1Q08554 894 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 USP51Q70EK9 711 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 NLGN4XQ8N0W4 816 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 OR6Q1Q8NGQ2 317 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 PHF21AQ96BD5 680 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 COL21A1Q96P44 957 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 PDFQ9HBH1 243 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 ZNF282Q9UDV7 671 aaPredicted RBP15.57■□□□□ 0.08
PCDH1-203ENST00000394536 PCDHB11Q9Y5F2 797 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 KIAA0100Q14667 2235 aaKnown RBP15.57■□□□□ 0.08
PCDH1-203ENST00000394536 STATHP02808 62 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 JUNBP17275 347 aaPredicted RBP15.57■□□□□ 0.08
PCDH1-203ENST00000394536 RYKP34925 604 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 ETV3P41162 512 aa15.57■□□□□ 0.08
PCDH1-203ENST00000394536 CTSOP43234 321 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms