RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 CRISP3P54108 245 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 ITGA1P56199 1179 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 CSNK2BP67870 215 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 TTLL9Q3SXZ7 439 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 FAHD1Q6P587 224 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 EIF3MQ7L2H7 374 aaKnown RBP10.72□□□□□ -0.69
CCDC40-203ENST00000374877 DENND1CQ8IV53 801 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 DNAJC22Q8N4W6 341 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 ZBTB2Q8N680 514 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 SKA2Q8WVK7 121 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-203ENST00000374877 FBXL12Q9NXK8 326 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 ARL15Q9NXU5 204 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 TAS2R16Q9NYV7 291 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 KIAA1671Q9BY89 1806 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-203ENST00000374877 PNMA8CA0A1B0GUJ8 204 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 SLC38A8A6NNN8 435 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 CLCA1A8K7I4 914 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 H7C0S8 307 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 RGS13O14921 159 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 ACSL4O60488 711 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 CYP7B1O75881 506 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 ZDHHC11BP0C7U3 371 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 ADORA3P0DMS8 318 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 SYN1P17600 705 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 PSMA3P25788 255 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 SOX6P35712 828 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 ZXDBP98169 803 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 UBE3AQ05086 875 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 ZNF177Q13360 481 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-203ENST00000374877 ATAD3CQ5T2N8 411 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 CBLL1Q75N03 491 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 RBFAQ8N0V3 343 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 OR52J3Q8NH60 311 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 SPPL2AQ8TCT8 520 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 FEVQ99581 238 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 A8MX80 341 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 MAGEB17A8MXT2 336 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 CTDSP2O14595 271 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 RGS5O15539 181 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 HOXB9P17482 250 aaPredicted RBP10.71□□□□□ -0.69
CCDC40-203ENST00000374877 RPL17P18621 184 aaKnown RBP10.71□□□□□ -0.69
CCDC40-203ENST00000374877 ATF6P18850 670 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 SLC15A1P46059 708 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 UGT2B15P54855 530 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 CDH4P55283 916 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 RING1Q06587 406 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 DMC1Q14565 340 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 ZNF544Q6NX49 715 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 CERS6Q6ZMG9 384 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 ZNF605Q86T29 641 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 TCEAL8Q8IYN2 117 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 CLECL1Q8IZS7 167 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 CYP4Z2PQ8N1L4 340 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 RNF175Q8N4F7 328 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 OR6K2Q8NGY2 324 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 OR2B2Q9GZK3 357 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 CCDC59Q9P031 241 aaKnown RBP10.71□□□□□ -0.69
CCDC40-203ENST00000374877 TBC1D14Q9P2M4 693 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 MKLN1Q9UL63 735 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 BTBD3Q9Y2F9 522 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 A3GALT2U3KPV4 340 aa10.71□□□□□ -0.69
CCDC40-203ENST00000374877 AP3D1O14617 1153 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 F11P03951 625 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 ANXA5P08758 320 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 NUDT7P0C024 238 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 RGS6P49758 472 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 SGSHP51688 502 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 ST3GAL4Q11206 333 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 DUOXA1Q1HG43 343 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 BCL7AQ4VC05 210 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 ATXN7L2Q5T6C5 722 aaPredicted RBP10.71□□□□□ -0.7
CCDC40-203ENST00000374877 RNF219Q5W0B1 726 aaPredicted RBP10.71□□□□□ -0.7
CCDC40-203ENST00000374877 ZSWIM9Q86XI8 627 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 PTOV1Q86YD1 416 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 SYT12Q8IV01 421 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 CDK5RAP1Q96SZ6 601 aaKnown RBP10.71□□□□□ -0.7
CCDC40-203ENST00000374877 SLC29A3Q9BZD2 475 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 RNF38Q9H0F5 515 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 BOLA1Q9Y3E2 137 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 PCDHGA3Q9Y5H0 932 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 LYVE1Q9Y5Y7 322 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 IRAK3Q9Y616 596 aa10.71□□□□□ -0.7
CCDC40-203ENST00000374877 C5orf67F2Z3F1 127 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 GFRA2O00451 464 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 KIAA0513O60268 411 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 TNFRSF1BP20333 461 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 GGT2P36268 569 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 SLC11A2P49281 568 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 PLD1Q13393 1074 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 MED22Q15528 200 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 ZFP69Q49AA0 526 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 NXNL2Q5VZ03 156 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 ERICH5Q6P6B1 374 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 OR6F1Q8NGZ6 308 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 MAL2Q969L2 176 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 TESCQ96BS2 214 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 COL21A1Q96P44 957 aa10.7□□□□□ -0.7
CCDC40-203ENST00000374877 NXF2Q9GZY0 626 aaKnown RBP10.7□□□□□ -0.7
CCDC40-203ENST00000374877 IMPAD1Q9NX62 359 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms