RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 SERPINA11Q86U17 422 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 CHPFQ8IZ52 775 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 SLC5A11Q8WWX8 675 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 MAGEB10Q96LZ2 347 aaPredicted RBP15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 DCUN1D5Q9BTE7 237 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 NAA50Q9GZZ1 169 aaKnown RBP15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 BRF2Q9HAW0 419 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 CCDC177Q9NQR7 707 aaPredicted RBP15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 FAM120CQ9NX05 1096 aaKnown RBP15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 DPP7Q9UHL4 492 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 CCNDBP1O95273 360 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 OPN1SWP03999 348 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 RB1P06400 928 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 C1GALT1C1LP0DN25 315 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 TNFRSF1BP20333 461 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 KDELR2P33947 212 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 PRSS53Q2L4Q9 553 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 DPY19L1Q2PZI1 675 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 COX20Q5RI15 118 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 CCNYL2Q5T2Q4 361 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 NAGSQ8N159 534 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 OR2L2Q8NH16 312 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 HSH2DQ96JZ2 352 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 DMRT3Q9NQL9 472 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 PCDHB11Q9Y5F2 797 aa15.37■□□□□ 0.05
CNKSR1-202ENST00000374253 H0YAE9 185 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 RTCAO00442 366 aaKnown RBP15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 TRMUO75648 421 aaKnown RBP15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 KAT7O95251 611 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 GPX2P18283 190 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 ACADLP28330 430 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 VASPP50552 380 aaPredicted RBP15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 SEC13P55735 322 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 HBA1P69905 142 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 CTU2Q2VPK5 515 aaKnown RBP15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 CYP27C1Q4G0S4 372 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 PIP5KL1Q5T9C9 394 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 GPR107Q5VW38 600 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 UBE2Q1Q7Z7E8 422 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 LRRC56Q8IYG6 542 aaPredicted RBP15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 RPP25Q9BUL9 199 aaKnown RBP15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 SGPP1Q9BX95 441 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 OCEL1Q9H607 264 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 EPHX3Q9H6B9 360 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 MBNL1Q9NR56 388 aaKnown RBP15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 SPASTQ9UBP0 616 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 PLXND1Q9Y4D7 1925 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 C6orf47O95873 294 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 DRD3P35462 400 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 HPCAL1P37235 193 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 CRATP43155 626 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 TAS2R50P59544 299 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 ESRRGP62508 458 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 SIM2Q14190 667 aaPredicted RBP15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 RAB39AQ14964 217 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 TMEM259Q4ZIN3 620 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 SPIN4Q56A73 249 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 BORAQ6PGQ7 559 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 NXPE4Q6UWF7 544 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 R3HCC1LQ7Z5L2 792 aaKnown RBP15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 C8orf59Q8N0T1 100 aaPredicted RBP15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 OR5K1Q8NHB7 308 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 RBM4BQ9BQ04 359 aaKnown RBP15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 RBM4Q9BWF3 364 aaKnown RBP15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 OR52A5Q9H2C5 316 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 TAC3Q9UHF0 121 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 TMEFF2Q9UIK5 374 aaPredicted RBP15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 SAMD4AQ9UPU9 718 aaKnown RBP15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 AP3M1Q9Y2T2 418 aa15.36■□□□□ 0.05
CNKSR1-202ENST00000374253 LINC01565O15544 149 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 PRMT3O60678 531 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 ETFAP13804 333 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 CRYBA2P53672 197 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 TAS2R38P59533 333 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 DPTQ07507 201 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 C2orf80Q0P641 193 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 RUNX3Q13761 415 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 COL9A2Q14055 689 aaPredicted RBP15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 EIF4HQ15056 248 aaKnown RBP15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 PDGFRLQ15198 375 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 WSCD2Q2TBF2 565 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 CPZQ66K79 652 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 THAP5Q7Z6K1 395 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 CYP4Z1Q86W10 505 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 AMZ2Q86W34 360 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 ARL10Q8N8L6 244 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 ZNF555Q8NEP9 628 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 OR52E4Q8NGH9 312 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 TFGQ92734 400 aaPredicted RBP15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 CUEDC1Q9NWM3 386 aaPredicted RBP15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 FEZF1A0PJY2 475 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 C1QTNF3-AMACRE9PGA6 284 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 FOXD2O60548 495 aaPredicted RBP15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 KLHL18O94889 574 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 PAK4O96013 591 aaPredicted RBP15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 STATHP02808 62 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 HSD3B1P14060 373 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 HSD3B2P26439 372 aa15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 CDK9P50750 372 aaKnown RBP15.35■□□□□ 0.05
CNKSR1-202ENST00000374253 ZNF763Q0D2J5 394 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms