RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 GTF2IRD2BQ6EKJ0 949 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 GTF2IRD2Q86UP8 949 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 NEIL3Q8TAT5 605 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 SLC25A51Q9H1U9 297 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 B4GALT4O60513 344 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 VIPP01282 170 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 CTXN3Q4LDR2 81 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 BCL7AQ4VC05 210 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 TXNRD3NBQ6F5E7 133 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 WDR53Q7Z5U6 358 aaPredicted RBP5.9□□□□□ -1.46
VPS13B-203ENST00000358544 BEST4Q8NFU0 473 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 SLC7A6Q92536 515 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 KCNA7Q96RP8 456 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 MAGIXQ9H6Y5 334 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 RAB19A4D1S5 217 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 PGAM2P15259 253 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 ARF4P18085 180 aaPredicted RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 CD247P20963 164 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 HTR1BP28222 390 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 PRAMEF13Q5VWM6 474 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 SLC36A4Q6YBV0 504 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 SPRED1Q7Z699 444 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 ZSWIM9Q86XI8 627 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 OR2L2Q8NH16 312 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 ZMAT5Q9UDW3 170 aaKnown RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 MAGED1Q9Y5V3 778 aaPredicted RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 PCDHGA12O60330 932 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 PPP1R11O60927 126 aaPredicted RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 SEC14L2O76054 403 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 PKMP14618 531 aaKnown RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 BMP7P18075 431 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 NKAPLQ5M9Q1 402 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 ZNF598Q86UK7 904 aaKnown RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 LILRA2Q8N149 483 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 OR4K2Q8NGD2 314 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 FCRL2Q96LA5 508 aaPredicted RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 CRAMP1Q96RY5 1269 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 HBEGFQ99075 208 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 PRDM5Q9NQX1 630 aaPredicted RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 CACNA1SQ13698 1873 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 SETD1AO15047 1707 aaKnown RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 J3KR12 359 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 PAK4O96013 591 aaPredicted RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 MMP10P09238 476 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 JUPP14923 745 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 POLR2CP19387 275 aaPredicted RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 SSTR4P31391 388 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 GRB14Q14449 540 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 COMTD1Q86VU5 262 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 CHST4Q8NCG5 386 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 PAPD5Q8NDF8 572 aaKnown RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 F8W036 122 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 ARPC5O15511 151 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 GATBO75879 557 aaKnown RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 FARS2O95363 451 aaKnown RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 H2AFB2P0C5Z0 115 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 SAGP10523 405 aaPredicted RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 BLOC1S1P78537 153 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 HMGCS1Q01581 520 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 SREBF2Q12772 1141 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 ARMC6Q6NXE6 501 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 OR1J4Q8NGS1 313 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 FDXACB1Q9BRP7 624 aaPredicted RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 TMEM39BQ9GZU3 492 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 PRAF2O60831 178 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 CRHBPP24387 322 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 RAB5CP51148 216 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 BCL2L1Q07817 233 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 CDC20Q12834 499 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 RPS27LQ71UM5 84 aaKnown RBP5.9□□□□□ -1.47
VPS13B-203ENST00000358544 TMEM192Q8IY95 271 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 SGK2Q9HBY8 427 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 SCP2D1Q9UJQ7 156 aa5.9□□□□□ -1.47
VPS13B-203ENST00000358544 MCM3APO60318 1980 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 H7C4K7 107 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 SORBS2O94875 1100 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TFP02787 698 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 HIST1H2ABP04908 130 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 STSP08842 583 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 RGS6P49758 472 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 MAXP61244 160 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 AIMP2Q13155 320 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ELOAQ14241 798 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 ATAT1Q5SQI0 421 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 FAM117BQ6P1L5 589 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 GDPGP1Q6ZNW5 385 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 HIST3H2AQ7L7L0 130 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 CELF2-AS1Q8N7Q2 184 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TMEM185AQ8NFB2 350 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 KCNJ9Q92806 393 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 HIST1H2ACQ93077 130 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 NDC1Q9BTX1 674 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 FN3KQ9H479 309 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 FBXO44Q9H4M3 255 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TLX2O43763 284 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 CAPN13Q6MZZ7 669 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 NANOGP8Q6NSW7 305 aa5.89□□□□□ -1.47
VPS13B-203ENST00000358544 TNFAIP8L2Q6P589 184 aaPredicted RBP5.89□□□□□ -1.47
VPS13B-203ENST00000358544 KRTCAP2Q8N6L1 136 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms