RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 UBE2FQ969M7 185 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 ASIC4Q96FT7 647 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 MYOCQ99972 504 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 THSD1Q9NS62 852 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 KLHL3Q9UH77 587 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 SLCO3A1Q9UIG8 710 aa17.09■□□□□ 0.33
RTN4-204ENST00000357732 LOC110117498-PIK3R3F6TDL0 507 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 H0YIV9 168 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 K7ERQ8 282 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 TBX1O43435 398 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 DYRK3O43781 588 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 SOX6P35712 828 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 HNF4AP41235 474 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 B4GALNT1Q00973 533 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 RBBP4Q09028 425 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 PPIGQ13427 754 aaKnown RBP eCLIP17.08■□□□□ 0.33
RTN4-204ENST00000357732 IRF3Q14653 427 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 CRTC1Q6UUV9 634 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 KLHDC8AQ8IYD2 350 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 GALNT6Q8NCL4 622 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 DBF4BQ8NFT6 615 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 PIK3R3Q92569 461 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 DPH2Q9BQC3 489 aaPredicted RBP17.08■□□□□ 0.33
RTN4-204ENST00000357732 VPS4AQ9UN37 437 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 PCDHGA2Q9Y5H1 932 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 PLXNB3Q9ULL4 1909 aa17.08■□□□□ 0.33
RTN4-204ENST00000357732 SH3D21A4FU49 640 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 NPIPB15A6NHN6 443 aaPredicted RBP17.08■□□□□ 0.32
RTN4-204ENST00000357732 DSCR3O14972 297 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 MPZL2O60487 215 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 CPSF4O95639 269 aaKnown RBP17.08■□□□□ 0.32
RTN4-204ENST00000357732 OXSR1O95747 527 aaPredicted RBP17.08■□□□□ 0.32
RTN4-204ENST00000357732 GABRB1P18505 474 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 C21orf33P30042 268 aaPredicted RBP17.08■□□□□ 0.32
RTN4-204ENST00000357732 CRYBA2P53672 197 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 IRF8Q02556 426 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 PRSS36Q5K4E3 855 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 CPTPQ5TA50 214 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 NPAS3Q8IXF0 933 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 PARP16Q8N5Y8 322 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 OR10G2Q8NGC3 310 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 OR6K2Q8NGY2 324 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 COQ8BQ96D53 544 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 FEVQ99581 238 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 CCDC32Q9BV29 185 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 EBPLQ9BY08 206 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 NMRK2Q9NPI5 230 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 CNOT2Q9NZN8 540 aaKnown RBP17.08■□□□□ 0.32
RTN4-204ENST00000357732 CFL2Q9Y281 166 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 KIAA1671Q9BY89 1806 aa17.08■□□□□ 0.32
RTN4-204ENST00000357732 THSD7BQ9C0I4 1608 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 C2orf78A6NCI8 922 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 RNASET2O00584 256 aaKnown RBP17.07■□□□□ 0.32
RTN4-204ENST00000357732 PRAMEF4O60810 478 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 DLGAP3O95886 979 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 SRPRAP08240 638 aaKnown RBP17.07■□□□□ 0.32
RTN4-204ENST00000357732 ADORA3P0DMS8 318 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 OR1D2P34982 312 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 SLC19A1P41440 591 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 RGS6P49758 472 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 UGT2B15P54855 530 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 PFN3P60673 137 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 SMAD3P84022 425 aaKnown RBP17.07■□□□□ 0.32
RTN4-204ENST00000357732 HSPA14Q0VDF9 509 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 TAF12Q16514 161 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 C10orf62Q5T681 223 aaPredicted RBP17.07■□□□□ 0.32
RTN4-204ENST00000357732 PRAMEF9Q5VWM5 478 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 Q6ZNB5 142 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 GALNT10Q86SR1 603 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 CLECL1Q8IZS7 167 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 STX19Q8N4C7 294 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 OR2AP1Q8NGE2 309 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 OR4C15Q8NGM1 316 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 ATL1Q8WXF7 558 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 ECHDC3Q96DC8 303 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 KCNC2Q96PR1 638 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 MCCC1Q96RQ3 725 aaPredicted RBP17.07■□□□□ 0.32
RTN4-204ENST00000357732 CDCA4Q9BXL8 241 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 ABCB8Q9NUT2 735 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 NDUFAF4Q9P032 175 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 SMAD6O43541 496 aaKnown RBP17.07■□□□□ 0.32
RTN4-204ENST00000357732 APOA1P02647 267 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 LAMP1P11279 417 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 TGFBR1P36897 503 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 ALDH9A1P49189 494 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 SREBF2Q12772 1141 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 VEPH1Q14D04 833 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 MICAQ29983 383 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 ATP13A5Q4VNC0 1218 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 IFI44LQ53G44 452 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 SPIN4Q56A73 249 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 MPP7Q5T2T1 576 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 TPGS2Q68CL5 300 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 GRHL2Q6ISB3 625 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 C19orf48Q6RUI8 117 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 NLRP8Q86W28 1048 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 NPAS4Q8IUM7 802 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 HTRA1Q92743 480 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 HOXD1Q9GZZ0 328 aa17.07■□□□□ 0.32
RTN4-204ENST00000357732 RNF186Q9NXI6 227 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms