RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 PCDH7O60245 1069 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 XYLBO75191 536 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 ITGAMP11215 1152 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 HOXB6P17509 224 aaKnown RBP14.86□□□□□ -0.03
UPF3B-202ENST00000345865 PCMT1P22061 227 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 RAD23AP54725 363 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 GABARAPL2P60520 117 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 MC1RQ01726 317 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 NFATC3Q12968 1075 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 STARD3Q14849 445 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 RGNQ15493 299 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 RFX4Q33E94 735 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 BCL7AQ4VC05 210 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 MED27Q6P2C8 311 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 NPAS3Q8IXF0 933 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 ETFBKMTQ8IXQ9 262 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 LRRC56Q8IYG6 542 aaPredicted RBP14.86□□□□□ -0.03
UPF3B-202ENST00000345865 POP5Q969H6 163 aaKnown RBP14.86□□□□□ -0.03
UPF3B-202ENST00000345865 C7orf34Q96L11 122 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 RIBC2Q9H4K1 309 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 EPHX3Q9H6B9 360 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 PRM3Q9NNZ6 103 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 SH3BP4Q9P0V3 963 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 RPS6KA6Q9UK32 745 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 MRPS23Q9Y3D9 190 aaKnown RBP14.86□□□□□ -0.03
UPF3B-202ENST00000345865 MGAT4DA6NG13 374 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 SLC9A3R1O14745 358 aaPredicted RBP14.86□□□□□ -0.03
UPF3B-202ENST00000345865 TLL1O43897 1013 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 MMP20O60882 483 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 FKBP9O95302 570 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 TGFB1P01137 390 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 ABCB1P08183 1280 aaPredicted RBP14.86□□□□□ -0.03
UPF3B-202ENST00000345865 ASMTP46597 345 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 MVDP53602 400 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 TMBIM6P55061 237 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 ST8SIA6P61647 398 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 IL1RL1Q01638 556 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 TAP2Q03519 686 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 BNIP3Q12983 259 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 VEZF1Q14119 521 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 SLBPQ14493 270 aaKnown RBP eCLIP14.86□□□□□ -0.03
UPF3B-202ENST00000345865 GAB4Q2WGN9 574 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 SPIN4Q56A73 249 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 COX20Q5RI15 118 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 GALNT18Q6P9A2 607 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 TSEN54Q7Z6J9 526 aaKnown RBP14.86□□□□□ -0.03
UPF3B-202ENST00000345865 ZBTB46Q86UZ6 589 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 FBXO15Q8NCQ5 510 aaPredicted RBP14.86□□□□□ -0.03
UPF3B-202ENST00000345865 ZNF740Q8NDX6 193 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 TBC1D15Q8TC07 691 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 FKBP10Q96AY3 582 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 TPD52L3Q96J77 140 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 NRTNQ99748 197 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 SGPP1Q9BX95 441 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 TRIT1Q9H3H1 467 aaKnown RBP14.86□□□□□ -0.03
UPF3B-202ENST00000345865 PDP1Q9P0J1 537 aaPredicted RBP14.86□□□□□ -0.03
UPF3B-202ENST00000345865 TMEM9Q9P0T7 183 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 SLC27A6Q9Y2P4 619 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 NAALAD2Q9Y3Q0 740 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 A0A0J9YVX5 310 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 HOXC11O43248 304 aaPredicted RBP14.85□□□□□ -0.03
UPF3B-202ENST00000345865 PAPLNO95428 1278 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 HNRNPA1P09651 372 aaKnown RBP eCLIP14.85□□□□□ -0.03
UPF3B-202ENST00000345865 C6P13671 934 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 DNAJA1P31689 397 aaKnown RBP14.85□□□□□ -0.03
UPF3B-202ENST00000345865 KCNJ10P78508 379 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 IL5RAQ01344 420 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 BIRC2Q13490 618 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 NFE2L1Q14494 772 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 PRSS53Q2L4Q9 553 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 MPEG1Q2M385 716 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 RAET1GQ6H3X3 334 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 CAPN13Q6MZZ7 669 aaPredicted RBP14.85□□□□□ -0.03
UPF3B-202ENST00000345865 RTL10Q7L3V2 364 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 COMMD6Q7Z4G1 85 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 CELF5Q8N6W0 485 aaKnown RBP14.85□□□□□ -0.03
UPF3B-202ENST00000345865 TERB1Q8NA31 727 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 B4GALNT2Q8NHY0 566 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 WDR48Q8TAF3 677 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 EZH1Q92800 747 aaPredicted RBP14.85□□□□□ -0.03
UPF3B-202ENST00000345865 NUS1Q96E22 293 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 DGCR6LQ9BY27 220 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 OR51B5Q9H339 312 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 PREBQ9HCU5 417 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 ZDHHC4Q9NPG8 344 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 PRKAB1Q9Y478 270 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 ORC6Q9Y5N6 252 aa14.85□□□□□ -0.03
UPF3B-202ENST00000345865 hCG_2014768A0A024R1R8 64 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 INMTO95050 263 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 PRNPP04156 253 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 FPR1P21462 350 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 ITGB7P26010 798 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 FMO3P31513 532 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 GPR1P46091 355 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 HBA1P69905 142 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 TUBA3CQ13748 450 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 ANKDD1AQ495B1 522 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 FAM83HQ6ZRV2 1179 aaPredicted RBP14.84□□□□□ -0.03
UPF3B-202ENST00000345865 B3GNT8Q7Z7M8 397 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 C12orf76Q8N812 135 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms