RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 A6NL46 340 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 GNALP38405 381 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 CDKN2CP42773 168 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 LEPRP48357 1165 aaKnown RBP11.75□□□□□ -0.53
COL12A1-202ENST00000345356 CRISP3P54108 245 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 DAOAP59103 153 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 CDK5R2Q13319 367 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 SLC36A3Q495N2 470 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 ELP2Q6IA86 826 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 SLC36A4Q6YBV0 504 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 CARM1Q86X55 608 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 CERS5Q8N5B7 392 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 CHDHQ8NE62 594 aaPredicted RBP11.75□□□□□ -0.53
COL12A1-202ENST00000345356 ARMC5Q96C12 935 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 BORCS6Q96GS4 357 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 P2RX7Q99572 595 aaKnown RBP11.75□□□□□ -0.53
COL12A1-202ENST00000345356 PDZD7Q9H5P4 517 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 GLS2Q9UI32 602 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 PCDHGB1Q9Y5G3 927 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 PCDHAC2Q9Y5I4 1007 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 C10orf71Q711Q0 1435 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 SMIM28A0A1B0GU29 152 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 YJEFN3A6XGL0 299 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 ACVR2AP27037 513 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 PGGT1BP53609 377 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 RABGGTBP53611 331 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 GJA9P57773 515 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 SGCGQ13326 291 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 FGL2Q14314 439 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 CRY2Q49AN0 593 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 CACUL1Q86Y37 369 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 ZDHHC14Q8IZN3 488 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 C2CD4AQ8NCU7 369 aaPredicted RBP11.75□□□□□ -0.53
COL12A1-202ENST00000345356 PAPD5Q8NDF8 572 aaKnown RBP11.75□□□□□ -0.53
COL12A1-202ENST00000345356 SIMC1Q8NDZ2 872 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 ATP6V1C2Q8NEY4 427 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 OR8K3Q8NH51 312 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 PYCR2Q96C36 320 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 NELL2Q99435 816 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 CALML5Q9NZT1 146 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 CYTH4Q9UIA0 394 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 RBM7Q9Y580 266 aaKnown RBP11.75□□□□□ -0.53
COL12A1-202ENST00000345356 FARS2O95363 451 aaKnown RBP11.75□□□□□ -0.53
COL12A1-202ENST00000345356 ENDOUP21128 410 aaKnown RBP11.75□□□□□ -0.53
COL12A1-202ENST00000345356 E2F1Q01094 437 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 KLHL26Q53HC5 615 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 FOXB2Q5VYV0 432 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 ATG9BQ674R7 924 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 KCTD9Q7L273 389 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 HDDC3Q8N4P3 179 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 CAMK1GQ96NX5 476 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 TWNKQ96RR1 684 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 CACNG6Q9BXT2 260 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 B3GNT4Q9C0J1 378 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 ZNF700Q9H0M5 742 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 VRTNQ9H8Y1 702 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 PCDHGB5Q9Y5G0 923 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 PPLO60437 1756 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 C1orf196B1AJZ1 125 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 PSMD9O00233 223 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 SAP18O00422 153 aaKnown RBP11.74□□□□□ -0.53
COL12A1-202ENST00000345356 MANBAO00462 879 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 XKRYO14609 159 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 BCHEP06276 602 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 C8GP07360 202 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 LMO2P25791 158 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 SNTB2Q13425 540 aaKnown RBP11.74□□□□□ -0.53
COL12A1-202ENST00000345356 BCL7AQ4VC05 210 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 SYPL2Q5VXT5 272 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 TSPYL5Q86VY4 417 aaPredicted RBP11.74□□□□□ -0.53
COL12A1-202ENST00000345356 RHOXF1Q8NHV9 184 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 ACOT12Q8WYK0 555 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 KIAA1191Q96A73 305 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 ACDQ96AP0 544 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 RANBP9Q96S59 729 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 RBCK1Q9BYM8 510 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 ERVK-19Q9WJR5 959 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 TSPOAP1O95153 1857 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 PRSS51A0A1B0GVH4 220 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 INHBCP55103 352 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 OR12D2P58182 307 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 PRKCDQ05655 676 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 GPR151Q8TDV0 419 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 C7orf34Q96L11 122 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 FBXL18Q96ME1 805 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 C7orf50Q9BRJ6 194 aaKnown RBP11.74□□□□□ -0.53
COL12A1-202ENST00000345356 CDADC1Q9BWV3 514 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 PCDHGB7Q9Y5F8 929 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 CDH10Q9Y6N8 788 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 CLDN11O75508 207 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 SLC35E2BP0CK96 405 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 PSEN2P49810 448 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 KHKP50053 298 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 APLP1P51693 650 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 CREMQ03060 361 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 IL10RBQ08334 325 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 TECRLQ5HYJ1 363 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 LINGO4Q6UY18 593 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 LRRC69Q6ZNQ3 347 aa11.74□□□□□ -0.53
COL12A1-202ENST00000345356 FCAMRQ8WWV6 532 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms