RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 TRMT61BQ9BVS5 477 aaKnown RBP12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 ASPNQ9BXN1 380 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 NEK6Q9HC98 313 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 TLR9Q9NR96 1032 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 MROH6A6NGR9 719 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 POP4O95707 220 aaKnown RBP12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 PAX3P23760 479 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 ANXA11P50995 505 aaKnown RBP12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 HK3P52790 923 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 MLLT1Q03111 559 aaPredicted RBP12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 EXOC3L2Q2M3D2 409 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 RUNDC3AQ59EK9 446 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 CRB2Q5IJ48 1285 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF730Q6ZMV8 503 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF517Q6ZMY9 492 aaPredicted RBP12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 SPRED1Q7Z699 444 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 FGD2Q7Z6J4 655 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 LINC01465Q8N7H1 131 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 ZFP41Q8N8Y5 198 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 SLC43A3Q8NBI5 491 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 OR13F1Q8NGS4 319 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 SORCS1Q8WY21 1168 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 RAD51AP1Q96B01 352 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 C11orf24Q96F05 449 aaPredicted RBP12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 ALPK1Q96QP1 1244 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 IL17CQ9P0M4 197 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 COL16A1Q07092 1604 aaPredicted RBP12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 ANKRD33BA6NCL7 494 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 RTCAO00442 366 aaKnown RBP12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF623O75123 536 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 ATP1B2P14415 290 aaPredicted RBP12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 SELPP16109 830 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 CSTF2P33240 577 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 CLCN4P51793 760 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 MVKQ03426 396 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 TYSND1Q2T9J0 566 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF544Q6NX49 715 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 OR8H1Q8NGG4 311 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 SLC9A6Q92581 669 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 PLD4Q96BZ4 506 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 RDH12Q96NR8 316 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 SLC38A2Q96QD8 506 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 SLC30A2Q9BRI3 323 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 MTG2Q9H4K7 406 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 ZDHHC4Q9NPG8 344 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 ZCCHC3Q9NUD5 404 aaKnown RBP12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 ENPP5Q9UJA9 477 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 FBXW2Q9UKT8 454 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 CLCA3PQ9Y6N3 262 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 DOCK5Q9H7D0 1870 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 HTR3EA5X5Y0 456 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 A6NL46 340 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 OR1F1O43749 312 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 NTSP30990 170 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 TIE1P35590 1138 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 YBX1P67809 324 aaKnown RBP12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 CBX2Q14781 532 aaPredicted RBP12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 DPY19L1Q2PZI1 675 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 UGT3A2Q3SY77 523 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 CTSL3PQ5NE16 218 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 C10orf62Q5T681 223 aaPredicted RBP12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 CHST9Q7L1S5 443 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 NAGSQ8N159 534 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 TMEM151AQ8N4L1 468 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 GOLM1Q8NBJ4 401 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 FCGR1BQ92637 280 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 KLK6Q92876 244 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 RHNO1Q9BSD3 238 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 ACPTQ9BZG2 426 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 DCAF13Q9NV06 445 aaKnown RBP12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 C5AR2Q9P296 337 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 ARID1AO14497 2285 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 RFPL2O75678 378 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 CCNYL3P0C7X3 344 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 HOXD12P35452 270 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 IDUAP35475 653 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 MAGEA8P43361 318 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 XKP51811 444 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 ATP12AP54707 1039 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 CLDN8P56748 225 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 FKBP1BP68106 108 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 DOC2AQ14183 400 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 NFE2L1Q14494 772 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 SOWAHCQ53LP3 525 aaPredicted RBP12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 SPATC1Q76KD6 591 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 MEX3DQ86XN8 651 aaKnown RBP12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 GALNT12Q8IXK2 581 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 NLGN4XQ8N0W4 816 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 HMGCLL1Q8TB92 370 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 ZFP3Q96NJ6 502 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 TEFMQ96QE5 360 aaKnown RBP12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 PHOX2BQ99453 314 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF282Q9UDV7 671 aaPredicted RBP12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 OARD1Q9Y530 152 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 NINQ8N4C6 2090 aa12.01□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF840PA6NDX5 716 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 TLR4O00206 839 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 PTGER1P34995 402 aa12□□□□□ -0.49
SNRNP48-201ENST00000342415 CDKN2CP42773 168 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms