RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 KCNIP3Q9Y2W7 256 aa7.81□□□□□ -1.16
TNPO1-201ENST00000337273 PORP16435 677 aaPredicted RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 ATXN7L3Q14CW9 347 aaPredicted RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 CHST9Q7L1S5 443 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 CENPSQ8N2Z9 138 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 SPERTQ8NA61 448 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 OR4C15Q8NGM1 316 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 AKT1S1Q96B36 256 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 PHOX2BQ99453 314 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 HCN3Q9P1Z3 774 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 PHF24Q9UPV7 400 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 CDH10Q9Y6N8 788 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 ANKRD26Q9UPS8 1709 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 CRY2Q49AN0 593 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 RAB12Q6IQ22 244 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 BRAT1Q6PJG6 821 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 ELAC1Q9H777 363 aaKnown RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 GLS2Q9UI32 602 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 SETD1AO15047 1707 aaKnown RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 SVILO95425 2214 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 LRRN3E7EW58 273 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 LRRTM2O43300 516 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 GRID2O43424 1007 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 CYP17A1P05093 508 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 PGAM2P15259 253 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 CD52P31358 61 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 ASB18Q6ZVZ8 466 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 FCAMRQ8WWV6 532 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 OR51V1Q9H2C8 321 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 LRRN3Q9H3W5 708 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 IFT52Q9Y366 437 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 HCN4Q9Y3Q4 1203 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 IGLV3-22A0A075B6J6 115 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 CNTN5O94779 1100 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 MT-CYBP00156 380 aaPredicted RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 CSTBP04080 98 aaKnown RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 VLDLRP98155 873 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 KCNC4Q03721 635 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 FPGSQ05932 587 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 POU4F2Q12837 409 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 MPP2Q14168 576 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 PAFAH1B3Q15102 231 aaKnown RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 ATG9BQ674R7 924 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 HACD2Q6Y1H2 254 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 CFAP52Q8N1V2 620 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TCEAL4Q96EI5 215 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 SLC35A5Q9BS91 424 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 FOLH1BQ9HBA9 442 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 LCHNA4D1U4 455 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 OXSR1O95747 527 aaPredicted RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 CPN2P22792 545 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 EDNRAP25101 427 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 ATP6AP1Q15904 470 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 COQ5Q5HYK3 327 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 LRIF1Q5T3J3 769 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 MRI1Q9BV20 369 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 MSI1O43347 362 aaKnown RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 EPOP01588 193 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 ENGP17813 658 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 MAD2L1BPQ15013 274 aaPredicted RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 FAM110CQ1W6H9 321 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 PYROXD2Q8N2H3 581 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 FAM86B1Q8N7N1 296 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TMEM184CQ9NVA4 438 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 SLC27A5Q9Y2P5 690 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 ZNF701M0R085 212 aaPredicted RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 PRICKLE3O43900 615 aaPredicted RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 CSF2P04141 144 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 XRCC1P18887 633 aaPredicted RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 MAGEA8P43361 318 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 ARFRP1Q13795 201 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 ATAT1Q5SQI0 421 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 PDE12Q6L8Q7 609 aaKnown RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 ZNF627Q7L945 461 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 HCAR2Q8TDS4 363 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TBX5Q99593 518 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 ZNF471Q9BX82 626 aaPredicted RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 CPNE5Q9HCH3 593 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 CFAP97Q9P2B7 532 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 HCN2Q9UL51 889 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TRAV6A0A075B6T7 132 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TBC1D3DA0A087WVF3 549 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TBC1D3IA0A087WXS9 549 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TBC1D3EA0A087X179 549 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TBC1D3KA0A087X1G2 549 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 SMCO3A2RU48 225 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TBC1D3FA6NER0 549 aaPredicted RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TBC1D3LB9A6J9 549 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TNFSF12O43508 249 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 PLATP00750 562 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TBC1D3HP0C7X1 549 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 GRK5P34947 590 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 RORAP35398 523 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TBC1D3GQ6DHY5 549 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TBC1D3CQ6IPX1 549 aa7.8□□□□□ -1.16
TNPO1-201ENST00000337273 RBM12BQ8IXT5 1001 aaKnown RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 TBC1D3Q8IZP1 549 aaPredicted RBP7.8□□□□□ -1.16
TNPO1-201ENST00000337273 ASCC1Q8N9N2 400 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms