RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 EIPR1Q53HC9 387 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 ATG9BQ674R7 924 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 CDC73Q6P1J9 531 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 RTL4Q6ZR62 310 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 EDAQ92838 391 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 ZNF347Q96SE7 839 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 BRINP2Q9C0B6 783 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 WNT16Q9UBV4 365 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 OR51B4Q9Y5P0 310 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 FAM86C2PA6NEL3 165 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 FOXO6A8MYZ6 492 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 B4DGG1 531 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 GTPBP1O00178 669 aaKnown RBP6.63□□□□□ -1.35
SF3B1-201ENST00000335508 SLC28A2O43868 658 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 MGRN1O60291 552 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 SEC24DO94855 1032 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-201ENST00000335508 G6PDP11413 515 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 CD6P30203 668 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 UGT2B15P54855 530 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 CSNK2BP67870 215 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 OLR1P78380 273 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 CDK6Q00534 326 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 IL5RAQ01344 420 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 HSPB3Q12988 150 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 PLA2G4EQ3MJ16 856 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 FOXR1Q6PIV2 292 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 PAOXQ6QHF9 649 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 NXPE4Q6UWF7 544 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 ASPGQ86U10 573 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 TMEM126BQ8IUX1 230 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 COX18Q8N8Q8 333 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 MDGA1Q8NFP4 955 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 OR4K14Q8NGD5 310 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 SLC9A6Q92581 669 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 DAZLQ92904 295 aaKnown RBP6.63□□□□□ -1.35
SF3B1-201ENST00000335508 LRRC58Q96CX6 371 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 MTFMTQ96DP5 389 aaKnown RBP6.63□□□□□ -1.35
SF3B1-201ENST00000335508 LPAR4Q99677 370 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 FBRSL1Q9HCM7 1045 aaKnown RBP6.63□□□□□ -1.35
SF3B1-201ENST00000335508 DNAJB9Q9UBS3 223 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 MCM8Q9UJA3 840 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 DUSP12Q9UNI6 340 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 MYO5AQ9Y4I1 1855 aaKnown RBP6.63□□□□□ -1.35
SF3B1-201ENST00000335508 FOXD2O60548 495 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-201ENST00000335508 SLITRK5O94991 958 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 CST1P01037 141 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 MAGP20916 626 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 CD27P26842 260 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 GABRB3P28472 473 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 RPL5P46777 297 aaKnown RBP6.63□□□□□ -1.35
SF3B1-201ENST00000335508 CCR5P51681 352 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 KIAA1024LP59773 190 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 CTBSQ01459 385 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 CYP4F3Q08477 520 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 SYCE2Q6PIF2 218 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 ADIPOR2Q86V24 386 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 RANBP3LQ86VV4 465 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-201ENST00000335508 MINDY1Q8N5J2 469 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 OR52B6Q8NGF0 335 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 OR10A6Q8NH74 314 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 KIAA1143Q96AT1 154 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-201ENST00000335508 TOE1Q96GM8 510 aaKnown RBP6.63□□□□□ -1.35
SF3B1-201ENST00000335508 NPAS2Q99743 824 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 ZFYVE21Q9BQ24 234 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 TMEM79Q9BSE2 394 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 RC3H2Q9HBD1 1191 aaKnown RBP6.63□□□□□ -1.35
SF3B1-201ENST00000335508 FBXW2Q9UKT8 454 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 KLHL20Q9Y2M5 609 aa6.63□□□□□ -1.35
SF3B1-201ENST00000335508 ARNTLO00327 626 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 OR10H3O60404 316 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 KRT36O76013 467 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 ALAS2P22557 587 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 P2RY2P41231 377 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 NR1H2P55055 460 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 POLE2P56282 527 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 ALDH6A1Q02252 535 aaKnown RBP6.62□□□□□ -1.35
SF3B1-201ENST00000335508 NR1D2Q14995 579 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 HKDC1Q2TB90 917 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 GPAT3Q53EU6 434 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 ETFBKMTQ8IXQ9 262 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 ZUFSPQ96AP4 578 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 ARRDC3Q96B67 414 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 OTULINQ96BN8 352 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 HSPA12BQ96MM6 686 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 GDF15Q99988 308 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 CHID1Q9BWS9 393 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 BOCQ9BWV1 1114 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 DOCK1Q14185 1865 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 PTPRQQ9UMZ3 2332 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 ARID1AO14497 2285 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 G3V2L1 256 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 M0QX08 132 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 HIST1H2ABP04908 130 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 IL7RP16871 459 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 CCR7P32248 378 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 S100A5P33763 92 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 AHRP35869 848 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 PTDSS1P48651 473 aaKnown RBP6.62□□□□□ -1.35
SF3B1-201ENST00000335508 HHEXQ03014 270 aa6.62□□□□□ -1.35
SF3B1-201ENST00000335508 SLC13A2Q13183 592 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms