RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 OR4D9Q8NGE8 314 aa20.57■□□□□ 0.88
TPM1-204ENST00000334895 CREB3L4Q8TEY5 395 aa20.57■□□□□ 0.88
TPM1-204ENST00000334895 CDC6Q99741 560 aa20.57■□□□□ 0.88
TPM1-204ENST00000334895 ZFYVE21Q9BQ24 234 aa20.57■□□□□ 0.88
TPM1-204ENST00000334895 ZFP69BQ9UJL9 534 aa20.57■□□□□ 0.88
TPM1-204ENST00000334895 FOXE1O00358 373 aaPredicted RBP20.56■□□□□ 0.88
TPM1-204ENST00000334895 NDUFAB1O14561 156 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 ZBTB11O95625 1053 aaPredicted RBP20.56■□□□□ 0.88
TPM1-204ENST00000334895 STATHP02808 62 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 THRAP10827 490 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 AHRP35869 848 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 GABRA4P48169 554 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 CSTF3Q12996 717 aaKnown RBP20.56■□□□□ 0.88
TPM1-204ENST00000334895 CLPPQ16740 277 aaPredicted RBP20.56■□□□□ 0.88
TPM1-204ENST00000334895 LARP4Q71RC2 724 aaKnown RBP eCLIP20.56■□□□□ 0.88
TPM1-204ENST00000334895 DNAJC22Q8N4W6 341 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 STON2Q8WXE9 905 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 TCTN2Q96GX1 697 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 GFM1Q96RP9 751 aaKnown RBP20.56■□□□□ 0.88
TPM1-204ENST00000334895 CCT7Q99832 543 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 AICDAQ9GZX7 198 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 AKTIPQ9H8T0 292 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 TOR4AQ9NXH8 423 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 AP1M2Q9Y6Q5 423 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 LOC105369274A0A096LPK9 316 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 LOC102723532A0A0G2JNH3 316 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 IGHV5-10-1A0A0J9YXX1 117 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 ANKDD1BA6NHY2 528 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 A8MU76 341 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 D6RAR5 112 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 TM4SF5O14894 197 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 SH3BGRLO75368 114 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 PRR35P0CG20 571 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 SEPHS1P49903 392 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 DEFB110Q30KQ9 67 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 LSM12Q3MHD2 195 aaKnown RBP20.56■□□□□ 0.88
TPM1-204ENST00000334895 HOMEZQ8IX15 550 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 OR4N4Q8N0Y3 316 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 ACTRT2Q8TDY3 377 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 KLHL6Q8WZ60 621 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 SLC41A2Q96JW4 573 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 MACROD1Q9BQ69 325 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 MS4A8Q9BY19 250 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 CHRNA10Q9GZZ6 450 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 BRF2Q9HAW0 419 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 PPT2Q9UMR5 302 aa20.56■□□□□ 0.88
TPM1-204ENST00000334895 SLC28A1O00337 649 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 LSM1O15116 133 aaKnown RBP20.55■□□□□ 0.88
TPM1-204ENST00000334895 CLEC3AO75596 197 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 TGFB1P01137 390 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 CTSBP07858 339 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 HSD3B1P14060 373 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 HSD3B2P26439 372 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 HYAL2Q12891 473 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 GKAP1Q5VSY0 366 aaPredicted RBP20.55■□□□□ 0.88
TPM1-204ENST00000334895 ARHGAP22Q7Z5H3 698 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 SLITRK4Q8IW52 837 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 TBC1D19Q8N5T2 526 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 GBP7Q8N8V2 638 aaPredicted RBP20.55■□□□□ 0.88
TPM1-204ENST00000334895 TTLQ8NG68 377 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 CCT6BQ92526 530 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 TUBGCP3Q96CW5 907 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 DPYSL5Q9BPU6 564 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 OR51B5Q9H339 312 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 ZNF768Q9H5H4 540 aaKnown RBP20.55■□□□□ 0.88
TPM1-204ENST00000334895 TCF7L2Q9NQB0 619 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 ADGRE2Q9UHX3 823 aa20.55■□□□□ 0.88
TPM1-204ENST00000334895 NPIPB8E9PQR5 432 aa20.54■□□□□ 0.88
TPM1-204ENST00000334895 H0YGG7 62 aa20.54■□□□□ 0.88
TPM1-204ENST00000334895 TOX3O15405 576 aaPredicted RBP20.54■□□□□ 0.88
TPM1-204ENST00000334895 P2RX6O15547 441 aa20.54■□□□□ 0.88
TPM1-204ENST00000334895 ANKRD34CP0C6C1 535 aa20.54■□□□□ 0.88
TPM1-204ENST00000334895 GSTM2P28161 218 aa20.54■□□□□ 0.88
TPM1-204ENST00000334895 SERPINB1P30740 379 aa20.54■□□□□ 0.88
TPM1-204ENST00000334895 PDX1P52945 283 aa20.54■□□□□ 0.88
TPM1-204ENST00000334895 ARF3P61204 181 aaPredicted RBP20.54■□□□□ 0.88
TPM1-204ENST00000334895 KCNAB1Q14722 419 aa20.54■□□□□ 0.88
TPM1-204ENST00000334895 TM4SF19Q96DZ7 209 aa20.54■□□□□ 0.88
TPM1-204ENST00000334895 THAP11Q96EK4 314 aa20.54■□□□□ 0.88
TPM1-204ENST00000334895 SEC16BQ96JE7 1060 aa20.54■□□□□ 0.88
TPM1-204ENST00000334895 CCDC74BQ96LY2 380 aa20.54■□□□□ 0.88
TPM1-204ENST00000334895 SOHLH2Q9NX45 425 aa20.54■□□□□ 0.88
TPM1-204ENST00000334895 SLC12A4Q9UP95 1085 aa20.54■□□□□ 0.88
TPM1-204ENST00000334895 APOBEC2Q9Y235 224 aaKnown RBP20.54■□□□□ 0.88
TPM1-204ENST00000334895 RGS14O43566 566 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 PEX11AO75192 247 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 PRPH2P23942 346 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 MLLT3P42568 568 aaPredicted RBP20.53■□□□□ 0.88
TPM1-204ENST00000334895 HSD11B2P80365 405 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 SPIDRQ14159 915 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 NR6A1Q15406 480 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 IMPG1Q17R60 797 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 B3GNT8Q7Z7M8 397 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 ASPGQ86U10 573 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 KMT5CQ86Y97 462 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 D2HGDHQ8N465 521 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 RCBTB1Q8NDN9 531 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 DEFB124Q8NES8 71 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 RTKNQ9BST9 563 aa20.53■□□□□ 0.88
TPM1-204ENST00000334895 CCDC28BQ9BUN5 200 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms