RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 PTPN6P29350 595 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.51■■□□□ 1.35
SOX1-201ENST00000330949 PTCHD3Q3KNS1 767 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 C9orf62Q8N4C0 152 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 CLHC1Q8NHS4 586 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 UTP15Q8TED0 518 aaKnown RBP23.51■■□□□ 1.35
SOX1-201ENST00000330949 FEVQ99581 238 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 CFAP20Q9Y6A4 193 aaKnown RBP23.51■■□□□ 1.35
SOX1-201ENST00000330949 IRAK2O43187 625 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 IGLV3-25P01717 112 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 PRKACAP17612 351 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 BRCC3P46736 316 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 HMGCS1Q01581 520 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 IKZF1Q13422 519 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 MZT2BQ6NZ67 158 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 GET4Q7L5D6 327 aaPredicted RBP23.51■■□□□ 1.35
SOX1-201ENST00000330949 ZNF551Q7Z340 670 aaPredicted RBP23.51■■□□□ 1.35
SOX1-201ENST00000330949 SIDT2Q8NBJ9 832 aaKnown RBP23.51■■□□□ 1.35
SOX1-201ENST00000330949 PMEPA1Q969W9 287 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 OPALINQ96PE5 141 aa23.51■■□□□ 1.35
SOX1-201ENST00000330949 HHLA1C9JL84 531 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 ATP6V1G2-DDX39BF2Z307 99 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 PER3P56645 1201 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 BEX3Q00994 111 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 GALNT10Q86SR1 603 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 ANKRD46Q86W74 232 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 RASAL3Q86YV0 1011 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 OR8H3Q8N146 312 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 GALNT11Q8NCW6 608 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 TADA1Q96BN2 335 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 PCED1BQ96HM7 432 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 HHATLQ9HCP6 504 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 RBFOX1Q9NWB1 397 aaKnown RBP23.5■■□□□ 1.35
SOX1-201ENST00000330949 PCDHGA2Q9Y5H1 932 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 WASHC1A8K0Z3 465 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 J3KR12 359 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 RFPL3O75679 317 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 TMEM65Q6PI78 240 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 PLEKHM3Q6ZWE6 761 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 DUSP18Q8NEJ0 188 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 LPPQ93052 612 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 MSANTD3Q96H12 275 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 TM9SF2Q99805 663 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 RACGAP1Q9H0H5 632 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 SP110Q9HB58 689 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 UCKL1Q9NWZ5 548 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 POFUT2Q9Y2G5 429 aa23.5■■□□□ 1.35
SOX1-201ENST00000330949 E9PAM4 449 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 SMLR1H3BR10 107 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 SERPINI2O75830 405 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 USP39Q53GS9 565 aaKnown RBP23.49■■□□□ 1.35
SOX1-201ENST00000330949 TEX261Q6UWH6 196 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 ARRDC2Q8TBH0 407 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 HASPINQ8TF76 798 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 TRIM62Q9BVG3 475 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 VPS9D1Q9Y2B5 631 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 U3KQ87 197 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 SH3D21A4FU49 640 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 RFXANKO14593 260 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 MLLT6P55198 1093 aaPredicted RBP23.49■■□□□ 1.35
SOX1-201ENST00000330949 SLC14A1Q13336 389 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 NADSYN1Q6IA69 706 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 OVOS1Q6IE37 1185 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 MSANTD2Q6P1R3 559 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 DTX3Q8N9I9 347 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 C19orf18Q8NEA5 215 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 UPF1Q92900 1129 aaKnown RBP eCLIP23.49■■□□□ 1.35
SOX1-201ENST00000330949 PCDH10Q9P2E7 1040 aa23.49■■□□□ 1.35
SOX1-201ENST00000330949 ULK1O75385 1050 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 LGI1O95970 557 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 CYP17A1P05093 508 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 BCKDHAP12694 445 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 PKMP14618 531 aaKnown RBP23.48■■□□□ 1.35
SOX1-201ENST00000330949 CDKN2CP42773 168 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 SOX9P48436 509 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 EIF2B5Q13144 721 aaKnown RBP23.48■■□□□ 1.35
SOX1-201ENST00000330949 SNTA1Q13424 505 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 EIF4EBP2Q13542 120 aaPredicted RBP23.48■■□□□ 1.35
SOX1-201ENST00000330949 ZNF267Q14586 743 aaPredicted RBP23.48■■□□□ 1.35
SOX1-201ENST00000330949 SLC39A12Q504Y0 691 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 NDUFAF5Q5TEU4 345 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 PLAG1Q6DJT9 500 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 PDE12Q6L8Q7 609 aaKnown RBP23.48■■□□□ 1.35
SOX1-201ENST00000330949 RNF165Q6ZSG1 346 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 FAM124AQ86V42 546 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 PAAF1Q9BRP4 392 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 STUB1Q9UNE7 303 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 COMMD10Q9Y6G5 202 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 A0A1W2PQL4 384 aaPredicted RBP23.48■■□□□ 1.35
SOX1-201ENST00000330949 HCN1O60741 890 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 CPT1AP50416 773 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 RHAGQ02094 409 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 DDI2Q5TDH0 399 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 AFTPHQ6ULP2 937 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 TPD52L3Q96J77 140 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 MSLNLQ96KJ4 702 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 C7orf34Q96L11 122 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 GPR137Q96N19 417 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 MCOLN1Q9GZU1 580 aa23.48■■□□□ 1.35
SOX1-201ENST00000330949 SPNS1Q9H2V7 528 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms