RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 LOC105369274A0A096LPK9 316 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 LOC102723532A0A0G2JNH3 316 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 CFAP99D6REC4 459 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 KDM1AO60341 852 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 SRP72O76094 671 aaKnown RBP13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 CNOT4O95628 575 aaKnown RBP13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 AP2A1O95782 977 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 GAS8O95995 478 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 HRGP04196 525 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 EIF2S1P05198 315 aaKnown RBP13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 PSMB4P28070 264 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 ACADLP28330 430 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 PKLRP30613 574 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 CYB561P49447 251 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 EXT1Q16394 746 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 PAOXQ6QHF9 649 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 HIPK1Q86Z02 1210 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 OR4N4Q8N0Y3 316 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 SLC35B2Q8TB61 432 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 M1APQ8TC57 530 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 CABS1Q96KC9 395 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 PLCD4Q9BRC7 762 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 YIPF4Q9BSR8 244 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 CDCP1Q9H5V8 836 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 HOMER3Q9NSC5 361 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 C19orf25Q9UFG5 118 aaPredicted RBP13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 CRLS1Q9UJA2 301 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 ZKSCAN5Q9Y2L8 839 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 MEGF8Q7Z7M0 2845 aa13.85□□□□□ -0.19
CTHRC1-201ENST00000330295 KLRC4-KLRK1H3BQV0 150 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 CES2O00748 559 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 STX7O15400 261 aaKnown RBP13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 DNAJB6O75190 326 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 CRTAMO95727 393 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 S1PR4O95977 384 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 AGTP01019 485 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 ANXA5P08758 320 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 ASCL1P50553 236 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 POU4F3Q15319 338 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 SF1Q15637 639 aaKnown RBP13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 LINC00523Q86TU6 105 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 TAX1BP1Q86VP1 789 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 CCDC89Q8N998 374 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 RELL2Q8NC24 303 aaPredicted RBP13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 CREB3L4Q8TEY5 395 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 ZUFSPQ96AP4 578 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 MMABQ96EY8 250 aaPredicted RBP13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 PERPQ96FX8 193 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 CYTH2Q99418 400 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 COPS8Q99627 209 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 TBL1YQ9BQ87 522 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 VN1R1Q9GZP7 353 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 DEFB127Q9H1M4 99 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 TRIM45Q9H8W5 580 aaPredicted RBP13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 LRRC40Q9H9A6 602 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 FOXD3Q9UJU5 478 aaPredicted RBP13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 JRKLQ9Y4A0 524 aa13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.84□□□□□ -0.19
CTHRC1-201ENST00000330295 ABCA1O95477 2261 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 A0A0J9YVX5 310 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 ERI2A8K979 691 aaKnown RBP13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 AGAP14A8MT82 685 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 TARM1B6A8C7 271 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 FAM47E-STBD1D6RA91 191 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 E7EVH7 732 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 BCKDKO14874 412 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 LIASO43766 372 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 PEX1O43933 1283 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 KIF5CO60282 957 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 CEP104O60308 925 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 IFNB1P01574 187 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 ERVK-10P10266 1014 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 FDFT1P37268 417 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 CHRNA4P43681 627 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 ITGA8P53708 1063 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 TAS2R50P59544 299 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 CCNG2Q16589 344 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 SYT16Q17RD7 645 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 FBXL19-AS1Q494R0 122 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 C4orf22Q6V702 233 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 RANBP10Q6VN20 620 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 RPS19BP1Q86WX3 136 aaKnown RBP13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 C2orf73Q8N5S3 287 aaPredicted RBP13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 LMNTD1Q8N9Z9 388 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 ZFP62Q8NB50 900 aaPredicted RBP13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 HEXDCQ8WVB3 486 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 NAP1L3Q99457 506 aaPredicted RBP13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 C19orf24Q9BVV8 132 aa13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 R3HDM2Q9Y2K5 976 aaKnown RBP13.83□□□□□ -0.2
CTHRC1-201ENST00000330295 TCRBV7S2A1N4TA0A589 114 aa13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 OR14I1A6ND48 311 aa13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 MBD3L4A6NDZ8 208 aaPredicted RBP13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 MBD3L5A6NJ08 208 aaPredicted RBP13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 NDC80O14777 642 aa13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 SPRY1O43609 319 aaPredicted RBP13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 FGGP02679 453 aa13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 CD9P21926 228 aa13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 TPP2P29144 1249 aaPredicted RBP13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 TAF1AQ15573 450 aaPredicted RBP13.82□□□□□ -0.2
CTHRC1-201ENST00000330295 PRTGQ2VWP7 1150 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms