RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 C5orf34Q96MH7 638 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 OR1F2PQ96R84 312 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 SLX1AQ9BQ83 275 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 VN1R1Q9GZP7 353 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 ANKHQ9HCJ1 492 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 ARL15Q9NXU5 204 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 RNF14Q9UBS8 474 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 CHMP2BQ9UQN3 213 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 CACNA1DQ01668 2161 aa12.84□□□□□ -0.35
GTF3C6-201ENST00000329970 TRBC2A0A5B9 178 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 PABPN1LA6NDY0 278 aaKnown RBP12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 TP73O15350 636 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 LCMT2O60294 686 aaKnown RBP12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 WFS1O76024 890 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 CDH1P12830 882 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 ZNF37AP17032 561 aaPredicted RBP12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 IL1RNP18510 177 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 ARL4CP56559 192 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 ARG2P78540 354 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 CDKL1Q00532 357 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 PWP1Q13610 501 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 HERC3Q15034 1050 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 ZNF324BQ6AW86 544 aaPredicted RBP12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 PLAG1Q6DJT9 500 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 H3F3CQ6NXT2 135 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 TRMT10BQ6PF06 316 aaKnown RBP12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 FAM180AQ6UWF9 173 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 SBSNQ6UWP8 590 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 PRSS41Q7RTY9 318 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 CPEB2Q7Z5Q1 589 aaKnown RBP12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 SLC26A11Q86WA9 606 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 BCORP1Q8N888 145 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 GPATCH11Q8N954 259 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 PLPP5Q8NEB5 264 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 SNF8Q96H20 258 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 OR4K3Q96R72 315 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 CYTH2Q99418 400 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 NAPGQ99747 312 aaPredicted RBP12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 OLFM1Q99784 485 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 CLK4Q9HAZ1 481 aaKnown RBP12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 MOCS1Q9NZB8 636 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 PTGFRNQ9P2B2 879 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 SAR1BQ9Y6B6 198 aa12.83□□□□□ -0.36
GTF3C6-201ENST00000329970 NOTCH2Q04721 2471 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 FEZF1A0PJY2 475 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 USP27XA6NNY8 438 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 CDK2AP1O14519 115 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 ITGAMP11215 1152 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 AHRP35869 848 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 XCR1P46094 333 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 CCR8P51685 355 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 ITGA8P53708 1063 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 SKP1P63208 163 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 PPP1R3AQ16821 1122 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 C4orf17Q53FE4 359 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 FAAH2Q6GMR7 532 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 MAMDC2Q7Z304 686 aaPredicted RBP12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 ZC3HC1Q86WB0 502 aaKnown RBP12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 PDSS2Q86YH6 399 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 NKAPQ8N5F7 415 aaKnown RBP12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 TBC1D19Q8N5T2 526 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 SIRT6Q8N6T7 355 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 KCT2Q8NC54 265 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 CATSPER1Q8NEC5 780 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 NT5CQ8TCD5 201 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 PDLIM2Q96JY6 352 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 MCMBPQ9BTE3 642 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 PELI2Q9HAT8 420 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 POPDC3Q9HBV1 291 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 PPANQ9NQ55 473 aaKnown RBP12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 NSMCE4AQ9NXX6 385 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 ZFATQ9P243 1243 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 SLC17A6Q9P2U8 582 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 TEKT2Q9UIF3 430 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 PCDHGB6Q9Y5F9 930 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 MYO7BQ6PIF6 2116 aa12.82□□□□□ -0.36
GTF3C6-201ENST00000329970 TTI1O43156 1089 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 JRKO75564 520 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 MYBL2P10244 700 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 PAFAH1B1P43034 410 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 SCTRP47872 440 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 TDGF1P3P51864 188 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 MGAT5Q09328 741 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 EXT1Q16394 746 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 TMEM207Q6UWW9 146 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 KLHL7Q8IXQ5 586 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 KLHDC8AQ8IYD2 350 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 BBOF1Q8ND07 529 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 OR1N1Q8NGS0 311 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 M1APQ8TC57 530 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 SLC5A11Q8WWX8 675 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 NEIL2Q969S2 332 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 PYCR2Q96C36 320 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 CFAP36Q96G28 342 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 CAPZA3Q96KX2 299 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 PWWP2AQ96N64 755 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 OLAHQ9NV23 265 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 ZFP69BQ9UJL9 534 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 NAALAD2Q9Y3Q0 740 aa12.81□□□□□ -0.36
GTF3C6-201ENST00000329970 TEX15Q9BXT5 2789 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms