RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 BCL7AQ4VC05 210 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 STK32CQ86UX6 486 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 TBC1D21Q8IYX1 336 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 CHCHD4Q8N4Q1 142 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 OR2L2Q8NH16 312 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 WDR48Q8TAF3 677 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 TFGQ92734 400 aaPredicted RBP11.96□□□□□ -0.5
RNF4-201ENST00000314289 TMBIM1Q969X1 311 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 CPPED1Q9BRF8 314 aaPredicted RBP11.96□□□□□ -0.5
RNF4-201ENST00000314289 RMND5AQ9H871 391 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 PCDHGA11Q9Y5H2 935 aa11.96□□□□□ -0.5
RNF4-201ENST00000314289 MUC22E2RYF6 1773 aaPredicted RBP11.96□□□□□ -0.5
RNF4-201ENST00000314289 MGAT4DA6NG13 374 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 H0YIV9 168 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 CLOCKO15516 846 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 NOBOXO60393 691 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 CBFA2T3O75081 653 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 DIRAS1O95057 198 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 ZNF682O95780 498 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 NUDT7P0C024 238 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 PORP16435 677 aaPredicted RBP11.95□□□□□ -0.5
RNF4-201ENST00000314289 ENGP17813 658 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 HNF4AP41235 474 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 WNT3P56703 355 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 DPTQ07507 201 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 PON2Q15165 354 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 ATP6AP1Q15904 470 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 SMU1Q2TAY7 513 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 TMEM52BQ4KMG9 183 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 FAM98BQ52LJ0 330 aaKnown RBP11.95□□□□□ -0.5
RNF4-201ENST00000314289 MED27Q6P2C8 311 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 TTC23LQ6PF05 361 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 RNF165Q6ZSG1 346 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 PLD3Q8IV08 490 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 MICU2Q8IYU8 434 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 TNIP2Q8NFZ5 429 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 CSGALNACT1Q8TDX6 532 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 MAL2Q969L2 176 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 PLEKHA8Q96JA3 519 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 TMEM121BQ9BXQ6 578 aaPredicted RBP11.95□□□□□ -0.5
RNF4-201ENST00000314289 SMURF2Q9HAU4 748 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 CD93Q9NPY3 652 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 TMEM45AQ9NWC5 275 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 KCNK6Q9Y257 313 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 DYRK1BQ9Y463 629 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 KIAA1549LQ6ZVL6 1849 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 A0A096LPI6 279 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 PIPSLA2A3N6 862 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 CLIC1O00299 241 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 CREG1O75629 220 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 APODP05090 189 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 POU2F2P09086 479 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 LAMP2P13473 410 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 PRPS1L1P21108 318 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 ACADLP28330 430 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 CLCNKAP51800 687 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 PNLIPRP1P54315 467 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 FOXD4Q12950 439 aaPredicted RBP11.95□□□□□ -0.5
RNF4-201ENST00000314289 SPIDRQ14159 915 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 FXNQ16595 210 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 CES5AQ6NT32 575 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 ARMCX6Q7L4S7 300 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 OR14C36Q8NHC7 312 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 SNX19Q92543 992 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 BORCS5Q969J3 196 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 SLC47A1Q96FL8 570 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 C9orf16Q9BUW7 83 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 OR52A5Q9H2C5 316 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 XKR8Q9H6D3 395 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 TAC3Q9UHF0 121 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 WDR37Q9Y2I8 494 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 TMED5Q9Y3A6 229 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 SDK1Q7Z5N4 2213 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 FEZF1A0PJY2 475 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 GRXCR2A6NFK2 248 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 RTCAO00442 366 aaKnown RBP11.95□□□□□ -0.5
RNF4-201ENST00000314289 GNGT2O14610 69 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 PCDH7O60245 1069 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 ERN1O75460 977 aaKnown RBP11.95□□□□□ -0.5
RNF4-201ENST00000314289 CST1P01037 141 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 RELAQ04206 551 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 CSTF3Q12996 717 aaKnown RBP11.95□□□□□ -0.5
RNF4-201ENST00000314289 ATAT1Q5SQI0 421 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 TBC1D15Q8TC07 691 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 TESCQ96BS2 214 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 TRMT61BQ9BVS5 477 aaKnown RBP11.95□□□□□ -0.5
RNF4-201ENST00000314289 MUC13Q9H3R2 512 aa11.95□□□□□ -0.5
RNF4-201ENST00000314289 CCDC177Q9NQR7 707 aaPredicted RBP11.95□□□□□ -0.5
RNF4-201ENST00000314289 CUEDC1Q9NWM3 386 aaPredicted RBP11.95□□□□□ -0.5
RNF4-201ENST00000314289 ZFR2Q9UPR6 939 aaKnown RBP11.95□□□□□ -0.5
RNF4-201ENST00000314289 RUVBL1Q9Y265 456 aaKnown RBP11.95□□□□□ -0.5
RNF4-201ENST00000314289 SLC31A1O15431 190 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 SCN2BO60939 215 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 RAP2AP10114 183 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 UMPSP11172 480 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 ZNF182P17025 639 aaPredicted RBP11.94□□□□□ -0.5
RNF4-201ENST00000314289 PRPH2P23942 346 aa11.94□□□□□ -0.5
RNF4-201ENST00000314289 EEF1B2P24534 225 aaKnown RBP11.94□□□□□ -0.5
RNF4-201ENST00000314289 RPS9P46781 194 aaKnown RBP11.94□□□□□ -0.5
RNF4-201ENST00000314289 IRF4Q15306 451 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms