RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 KCNK6Q9Y257 313 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 AP1M2Q9Y6Q5 423 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 CYP3A7-CYP3A51PA0A087WV96 503 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 IRGMA1A4Y4 181 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 SLC38A8A6NNN8 435 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 PRAMEF12O95522 483 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 RLN2P04090 185 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 MAS1P04201 325 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 AKR1C4P17516 323 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 CYP3A7P24462 503 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 DSTNP60981 165 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 HNF4GQ14541 408 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 OR52E4Q8NGH9 312 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 THAP6Q8TBB0 222 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 CD99L2Q8TCZ2 262 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 DGAT2Q96PD7 388 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 CARS2Q9HA77 564 aaKnown RBP12.28□□□□□ -0.44
USP38-201ENST00000307017 MATN3O15232 486 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 CFIP05156 583 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 SPARCP09486 303 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 ZBTB48P10074 688 aaPredicted RBP12.28□□□□□ -0.44
USP38-201ENST00000307017 CCKBRP32239 447 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 TAS2R50P59544 299 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 ENPP2Q13822 863 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 DCDC5Q6ZRR9 648 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 NIPA1Q7RTP0 329 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 LHFPL3Q86UP9 236 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 OR51G2Q8NGK0 314 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 TMEM41AQ96HV5 264 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 DPAGT1Q9H3H5 408 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 DNAJB9Q9UBS3 223 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 ZNF726A6NNF4 738 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 MMP20O60882 483 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 CPNE6O95741 557 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 PARP15Q460N3 678 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 LRRC57Q8N9N7 239 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 SOCS4Q8WXH5 440 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 ACOT12Q8WYK0 555 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 FOXN4Q96NZ1 517 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 PTPRMP28827 1452 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 C5orf60A6NFR6 353 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 ZNF254O75437 659 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 LCN1P31025 176 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 EVI2BP34910 448 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 DAG1Q14118 895 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 SWT1Q5T5J6 900 aaKnown RBP12.28□□□□□ -0.44
USP38-201ENST00000307017 P4HA3Q7Z4N8 544 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 XKR8Q9H6D3 395 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 IL36AQ9UHA7 158 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 NUMA1Q14980 2115 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 FLT3LGP49771 235 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 CBLBQ13191 982 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 RAB39AQ14964 217 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 PHPT1Q9NRX4 125 aaPredicted RBP12.27□□□□□ -0.44
USP38-201ENST00000307017 ZCCHC3Q9NUD5 404 aaKnown RBP12.27□□□□□ -0.44
USP38-201ENST00000307017 KLRF1Q9NZS2 232 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 MRTO4Q9UKD2 239 aaKnown RBP12.27□□□□□ -0.44
USP38-201ENST00000307017 SLC15A5A6NIM6 579 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 AGPAT2O15120 278 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 BMP1P13497 986 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 HERVK_113P63132 956 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 PRKCZQ05513 592 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 MAP4K2Q12851 820 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 MAD2L1BPQ15013 274 aaPredicted RBP12.27□□□□□ -0.44
USP38-201ENST00000307017 CCL14Q16627 93 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 Q6ZVU0 165 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 BIRC7Q96CA5 298 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 ERVK-6Q9BXR3 956 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 TRIM36Q9NQ86 728 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 FARSBQ9NSD9 589 aaKnown RBP12.27□□□□□ -0.44
USP38-201ENST00000307017 DEC1Q9P2X7 70 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 PCDHB1Q9Y5F3 818 aa12.27□□□□□ -0.44
USP38-201ENST00000307017 REM1O75628 298 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 GPIP06744 558 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 FESP07332 822 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 GNRHRP30968 328 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 SMAD2Q15796 467 aaKnown RBP12.27□□□□□ -0.45
USP38-201ENST00000307017 ABHD15Q6UXT9 468 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 RAB2BQ8WUD1 216 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 HSD17B14Q9BPX1 270 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 PAQR5Q9NXK6 330 aaPredicted RBP12.27□□□□□ -0.45
USP38-201ENST00000307017 FBXW11Q9UKB1 542 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 RNF13O43567 381 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 CYB5AP00167 134 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 CSTBP04080 98 aaKnown RBP12.27□□□□□ -0.45
USP38-201ENST00000307017 GTF2F2P13984 249 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 CD53P19397 219 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 CAV3P56539 151 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 IER5LQ5T953 404 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 SFRP4Q6FHJ7 346 aaPredicted RBP12.27□□□□□ -0.45
USP38-201ENST00000307017 ABHD5Q8WTS1 349 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 TMCO6Q96DC7 493 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 NUS1Q96E22 293 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 MND1Q9BWT6 205 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 LDAHQ9H6V9 325 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 TUBA8Q9NY65 449 aaPredicted RBP12.27□□□□□ -0.45
USP38-201ENST00000307017 CNTN6Q9UQ52 1028 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 CEMIPQ8WUJ3 1361 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 A8MT66 165 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 CFL1P23528 166 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms