RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 PSMC3IPQ9P2W1 217 aaPredicted RBP16.09■□□□□ 0.17
NDUFA3-201ENST00000303553 UBXN8O00124 270 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 PEX12O00623 359 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 TAPBPO15533 448 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 LCMT2O60294 686 aaKnown RBP16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 CCNT2O60583 730 aaKnown RBP16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 RFPL1O75677 317 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 MED26O95402 600 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 NSA2O95478 260 aaKnown RBP16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 FAM87AP0C7U9 286 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 C1GALT1C1LP0DN25 315 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 MYBL2P10244 700 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 GFAPP14136 432 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 OTX2P32243 289 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 HPDP32754 393 aaPredicted RBP16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 SCTRP47872 440 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 ALDH18A1P54886 795 aaKnown RBP16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 KCNAB2Q13303 367 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 LY6DQ14210 128 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 HERC3Q15034 1050 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 PAGE2BQ5JRK9 111 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 MED25Q71SY5 747 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 ABHD13Q7L211 337 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 LCA5Q86VQ0 697 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 ARHGEF39Q8N4T4 335 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 TMEM102Q8N9M5 508 aaPredicted RBP16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 MIEF2Q96C03 454 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 PTCD3Q96EY7 689 aaKnown RBP16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 EFCAB11Q9BUY7 163 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 ANKZF1Q9H8Y5 726 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 ANKHQ9HCJ1 492 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 ACSS2Q9NR19 701 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 SEMA3GQ9NS98 782 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 OPTCQ9UBM4 332 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 TRPC4Q9UBN4 977 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 CTSFQ9UBX1 484 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 G3BP2Q9UN86 482 aaKnown RBP16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 MAP4K5Q9Y4K4 846 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 SLC22A7Q9Y694 548 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 NUP210LQ5VU65 1888 aa16.08■□□□□ 0.16
NDUFA3-201ENST00000303553 IGLV3-12A0A075B6K2 115 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 A0A0A6YYC8 382 aaPredicted RBP16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 VSTM2BA6NLU5 285 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 MKRN2OSH3BPM6 223 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 I3L1I5 382 aaPredicted RBP16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 K7EPI3 171 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 SERPIND1P05546 499 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 GMPRP36959 345 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 PIK3CGP48736 1102 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 LAPTM5Q13571 262 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 RBBP5Q15291 538 aaKnown RBP16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 C18orf21Q32NC0 220 aaPredicted RBP16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 TECRLQ5HYJ1 363 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 METTL2BQ6P1Q9 378 aaKnown RBP16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 TMIGD1Q6UXZ0 262 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 SLCO4C1Q6ZQN7 724 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 MRGPREQ86SM8 312 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 NT5CQ8TCD5 201 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 STT3BQ8TCJ2 826 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 FER1L6-AS2Q96M78 137 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 SPSB2Q99619 263 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 YIPF2Q9BWQ6 316 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 NT5DC2Q9H857 520 aa16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 TNPO3Q9Y5L0 923 aaKnown RBP16.07■□□□□ 0.16
NDUFA3-201ENST00000303553 PCDH17O14917 1159 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 FOXS1O43638 330 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 CNOT3O75175 753 aaKnown RBP16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 ZGLP1P0C6A0 271 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 EPB42P16452 691 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 MMP11P24347 488 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 KCNC1P48547 511 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 COL9A2Q14055 689 aaPredicted RBP16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 SLBPQ14493 270 aaKnown RBP eCLIP16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 SETDB1Q15047 1291 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 HIST2H2ACQ16777 129 aaPredicted RBP16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 XKR6Q5GH73 641 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 HIST2H2AA3Q6FI13 130 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 TIFABQ6ZNK6 161 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 KCT2Q8NC54 265 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 ZNF740Q8NDX6 193 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 ZCCHC10Q8TBK6 192 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 UBE2E3Q969T4 207 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 WDR34Q96EX3 536 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 SCYL1Q96KG9 808 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 GPR78Q96P69 363 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 CRB3Q9BUF7 120 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 TGIF2Q9GZN2 237 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 ING2Q9H160 280 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 SPNS1Q9H2V7 528 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 SOX17Q9H6I2 414 aaPredicted RBP16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 CPSF2Q9P2I0 782 aaKnown RBP16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 COPG2Q9UBF2 871 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 ANGPTL3Q9Y5C1 460 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 CCDC88CQ9P219 2028 aa16.06■□□□□ 0.16
NDUFA3-201ENST00000303553 ARGFXA6NJG6 315 aa16.05■□□□□ 0.16
NDUFA3-201ENST00000303553 MAP2K7O14733 419 aa16.05■□□□□ 0.16
NDUFA3-201ENST00000303553 KLK8O60259 260 aa16.05■□□□□ 0.16
NDUFA3-201ENST00000303553 SMIM24O75264 130 aa16.05■□□□□ 0.16
NDUFA3-201ENST00000303553 STATHP02808 62 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms