RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 ACTL8Q9H568 366 aa20.19■□□□□ 0.82
SMCO4-201ENST00000298966 KCNK13Q9HB14 408 aa20.19■□□□□ 0.82
SMCO4-201ENST00000298966 UTP6Q9NYH9 597 aaKnown RBP20.19■□□□□ 0.82
SMCO4-201ENST00000298966 CCT8L1PA6NM43 557 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 DCTN3O75935 186 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 FGF4P08620 206 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 SLC35G4P0C7Q5 338 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 IDSP22304 550 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 ACADLP28330 430 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 ARFIP2P53365 341 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 PKNOX1P55347 436 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 CLCQ05315 142 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 TMEM26Q6ZUK4 368 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 LRRC70Q7Z2Q7 622 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 TRIM48Q8IWZ4 208 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 KLHDC8AQ8IYD2 350 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 PRR7Q8TB68 274 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 MAGEB10Q96LZ2 347 aaPredicted RBP20.18■□□□□ 0.82
SMCO4-201ENST00000298966 CD244Q9BZW8 370 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 WWP1Q9H0M0 922 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 PFDN4Q9NQP4 134 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 ACSS2Q9NR19 701 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 MAP10Q9P2G4 905 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 DCTN4Q9UJW0 460 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 PCTPQ9UKL6 214 aa20.18■□□□□ 0.82
SMCO4-201ENST00000298966 NCF1BA6NI72 391 aaPredicted RBP20.17■□□□□ 0.82
SMCO4-201ENST00000298966 NCF1CA8MVU1 366 aaPredicted RBP20.17■□□□□ 0.82
SMCO4-201ENST00000298966 E2F3O00716 465 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 VIPP01282 170 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 NCF1P14598 390 aaPredicted RBP20.17■□□□□ 0.82
SMCO4-201ENST00000298966 VARSP26640 1264 aaKnown RBP20.17■□□□□ 0.82
SMCO4-201ENST00000298966 HSD17B2P37059 387 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 CCL11P51671 97 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 ABRQ12979 859 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 CDC16Q13042 620 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 IFT88Q13099 833 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 MRPL49Q13405 166 aaKnown RBP20.17■□□□□ 0.82
SMCO4-201ENST00000298966 UGT8Q16880 541 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 CPZQ66K79 652 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 WASH2PQ6VEQ5 465 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 TRPM8Q7Z2W7 1104 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 DCUN1D3Q8IWE4 304 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 RAD51AP1Q96B01 352 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 THOC1Q96FV9 657 aaKnown RBP20.17■□□□□ 0.82
SMCO4-201ENST00000298966 TMEM120AQ9BXJ8 343 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 OSGEPL1Q9H4B0 414 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 WASH6PQ9NQA3 447 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 OPTCQ9UBM4 332 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 FAM8A1Q9UBU6 413 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 TSR3Q9UJK0 312 aaKnown RBP20.17■□□□□ 0.82
SMCO4-201ENST00000298966 ZNF451Q9Y4E5 1061 aa20.17■□□□□ 0.82
SMCO4-201ENST00000298966 A0A0G2JND7 137 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 ARGFXA6NJG6 315 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 TRPC5OSA6NMA1 111 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 ZNF839A8K0R7 811 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 ARHGEF33A8MVX0 844 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 K7EPI3 171 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 MYO1CO00159 1063 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 HDAC3O15379 428 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 KDM1AO60341 852 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 STK16O75716 305 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 SIX3O95343 332 aaPredicted RBP20.16■□□□□ 0.82
SMCO4-201ENST00000298966 C1orf105O95561 183 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 GUCA1CO95843 209 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 CHRNGP07510 517 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 XRCC1P18887 633 aaPredicted RBP20.16■□□□□ 0.82
SMCO4-201ENST00000298966 PDHA2P29803 388 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 SF3A3Q12874 501 aaKnown RBP eCLIP20.16■□□□□ 0.82
SMCO4-201ENST00000298966 CHAF1BQ13112 559 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 PLA2G4EQ3MJ16 856 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 CACHD1Q5VU97 1274 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 PRSS42Q7Z5A4 293 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 CUZD1Q86UP6 607 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 ZNF781Q8N8C0 355 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 GBP7Q8N8V2 638 aaPredicted RBP20.16■□□□□ 0.82
SMCO4-201ENST00000298966 RMDN2Q96LZ7 410 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 ZNF382Q96SR6 550 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 GPR87Q9BY21 358 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 PDE7BQ9NP56 450 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 SLAMF7Q9NQ25 335 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 KLC4Q9NSK0 619 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 PNPOQ9NVS9 261 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 SLC23A2Q9UGH3 650 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 PCDHGB7Q9Y5F8 929 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 HEBP2Q9Y5Z4 205 aa20.16■□□□□ 0.82
SMCO4-201ENST00000298966 MATN2O00339 956 aa20.15■□□□□ 0.82
SMCO4-201ENST00000298966 CLDN1O95832 211 aa20.15■□□□□ 0.82
SMCO4-201ENST00000298966 OTCP00480 354 aa20.15■□□□□ 0.82
SMCO4-201ENST00000298966 HALP42357 657 aa20.15■□□□□ 0.82
SMCO4-201ENST00000298966 RPS15P62841 145 aaKnown RBP20.15■□□□□ 0.82
SMCO4-201ENST00000298966 FAM83HQ6ZRV2 1179 aaPredicted RBP20.15■□□□□ 0.82
SMCO4-201ENST00000298966 SYVN1Q86TM6 617 aa20.15■□□□□ 0.82
SMCO4-201ENST00000298966 TICAM1Q8IUC6 712 aa20.15■□□□□ 0.82
SMCO4-201ENST00000298966 TBC1D21Q8IYX1 336 aa20.15■□□□□ 0.82
SMCO4-201ENST00000298966 CLYBLQ8N0X4 340 aa20.15■□□□□ 0.82
SMCO4-201ENST00000298966 RAB42Q8N4Z0 105 aa20.15■□□□□ 0.82
SMCO4-201ENST00000298966 LILRA3Q8N6C8 439 aaPredicted RBP20.15■□□□□ 0.82
SMCO4-201ENST00000298966 KLHL6Q8WZ60 621 aa20.15■□□□□ 0.82
SMCO4-201ENST00000298966 CCT6BQ92526 530 aa20.15■□□□□ 0.82
SMCO4-201ENST00000298966 TFGQ92734 400 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms