RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 SYNPO2LQ9H987 977 aa24.6■■□□□ 1.53
SDCCAG3-201ENST00000298537 CCM2LQ9NUG4 571 aaPredicted RBP24.6■■□□□ 1.53
SDCCAG3-201ENST00000298537 ZNF624Q9P2J8 865 aaPredicted RBP24.6■■□□□ 1.53
SDCCAG3-201ENST00000298537 PCDHB3Q9Y5E6 796 aa24.6■■□□□ 1.53
SDCCAG3-201ENST00000298537 COL9A2Q14055 689 aaPredicted RBP24.59■■□□□ 1.53
SDCCAG3-201ENST00000298537 TBCELQ5QJ74 424 aa24.59■■□□□ 1.53
SDCCAG3-201ENST00000298537 PTCRAQ6ISU1 281 aaPredicted RBP24.59■■□□□ 1.53
SDCCAG3-201ENST00000298537 PRR23BQ6ZRT6 265 aa24.59■■□□□ 1.53
SDCCAG3-201ENST00000298537 TICAM1Q8IUC6 712 aa24.59■■□□□ 1.53
SDCCAG3-201ENST00000298537 FBXL6Q8N531 539 aa24.59■■□□□ 1.53
SDCCAG3-201ENST00000298537 ZNF548Q8NEK5 533 aaPredicted RBP24.59■■□□□ 1.53
SDCCAG3-201ENST00000298537 OR2T12Q8NG77 320 aa24.59■■□□□ 1.53
SDCCAG3-201ENST00000298537 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.59■■□□□ 1.53
SDCCAG3-201ENST00000298537 HLA-CQ95604 372 aa24.59■■□□□ 1.53
SDCCAG3-201ENST00000298537 CDX2Q99626 313 aaPredicted RBP24.59■■□□□ 1.53
SDCCAG3-201ENST00000298537 KAT8Q9H7Z6 458 aaKnown RBP24.59■■□□□ 1.53
SDCCAG3-201ENST00000298537 C10orf142B7Z368 130 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 PPM1DO15297 605 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 HOXC4P09017 264 aaPredicted RBP24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 HSD17B2P37059 387 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 PIK3CBP42338 1070 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 CCR8P51685 355 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 CSNK1G2P78368 415 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 GALNT18Q6P9A2 607 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 ZNF852Q6ZMS4 543 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 KRT78Q8N1N4 520 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 GALNT4Q8N4A0 578 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 DEFB119Q8N690 84 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 PPWD1Q96BP3 646 aaKnown RBP24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 PANX1Q96RD7 426 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 SEPHS2Q99611 448 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 FOXQ1Q9C009 403 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 RMND5AQ9H871 391 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 POLMQ9NP87 494 aaPredicted RBP24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 INVSQ9Y283 1065 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 KRBA1A5PL33 1030 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 ERN1O75460 977 aaKnown RBP24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 SRP54P61011 504 aaKnown RBP24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 FZD5Q13467 585 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 SPATS1Q496A3 300 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 NRROSQ86YC3 692 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 FAM9CQ8IZT9 166 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 METTL4Q8N3J2 472 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 FAM86B1Q8N7N1 296 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 OR4K1Q8NGD4 311 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 PNPT1Q8TCS8 783 aaKnown RBP24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 PATE1Q8WXA2 126 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 FIG4Q92562 907 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 DUSP26Q9BV47 211 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 SH3BP4Q9P0V3 963 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 KLF15Q9UIH9 416 aa24.58■■□□□ 1.53
SDCCAG3-201ENST00000298537 PLPP1O14494 284 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 CELA2BP08218 269 aaPredicted RBP24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 HTR1BP28222 390 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 GZMMP51124 257 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 REEP5Q00765 189 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 OR8J2Q8NGG1 315 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 OR2L8Q8NGY9 312 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 NELL1Q92832 810 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 GBP5Q96PP8 586 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 AIF1LQ9BQI0 150 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 ZNF717Q9BY31 904 aaPredicted RBP24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 PELI2Q9HAT8 420 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 SLC6A20Q9NP91 592 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 PLXND1Q9Y4D7 1925 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 ARHGEF17Q96PE2 2063 aaPredicted RBP24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 A0A0G2JN53 185 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 OR1F1O43749 312 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 APBB3O95704 486 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 GGT1P19440 569 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 AKT2P31751 481 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 TAS2R50P59544 299 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 SRSF11Q05519 484 aaKnown RBP24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 PRDX1Q06830 199 aaKnown RBP24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 ZNF763Q0D2J5 394 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 ZNF621Q6ZSS3 439 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 OR4E2Q8NGC2 313 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 C16orf78Q8WTQ4 265 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 TRIM15Q9C019 465 aa24.57■■□□□ 1.52
SDCCAG3-201ENST00000298537 CKMT2P17540 419 aa24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 DGKEP52429 567 aa24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 UBXN2BQ14CS0 331 aa24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 DUOXA1Q1HG43 343 aa24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 CPTPQ5TA50 214 aa24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 CIDECQ96AQ7 238 aaPredicted RBP24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 METTL2AQ96IZ6 378 aaKnown RBP24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 CENPKQ9BS16 269 aa24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 AICDAQ9GZX7 198 aa24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 ARMC1Q9NVT9 282 aa24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 LRCH1Q9Y2L9 728 aa24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 ANKDD1BA6NHY2 528 aa24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 PRICKLE3O43900 615 aaPredicted RBP24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 PRMT3O60678 531 aa24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 TPP2P29144 1249 aaPredicted RBP24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 SFSWAPQ12872 951 aaKnown RBP24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 MPEG1Q2M385 716 aa24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 SYT13Q7L8C5 426 aa24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 SLC9B2Q86UD5 537 aa24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 TMEM132CQ8N3T6 1108 aa24.56■■□□□ 1.52
SDCCAG3-201ENST00000298537 AMER3Q8N944 861 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms