RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 CBR4Q8N4T8 237 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 SHKBP1Q8TBC3 707 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 GEMIN6Q8WXD5 167 aaKnown RBP17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 RELTQ969Z4 430 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 MGME1Q9BQP7 344 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 DPH7Q9BTV6 452 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 CSNK1G1Q9HCP0 422 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 CASKO14936 926 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 TRIM3O75382 744 aaPredicted RBP17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 HMGN1P05114 100 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 BCHEP06276 602 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 MEF2AQ02078 507 aaPredicted RBP17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 HHEXQ03014 270 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 ITGADQ13349 1161 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 UNC5DQ6UXZ4 953 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 MOAP1Q96BY2 351 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 TMEM233B4DJY2 109 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 MNDAP41218 407 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 KCNC1P48547 511 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 MTTPP55157 894 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 RPS15AP62244 130 aaKnown RBP17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 TRAP1Q12931 704 aaKnown RBP17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 ZNF630Q2M218 657 aaPredicted RBP17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 SLC25A24Q6NUK1 477 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 IGDCC3Q8IVU1 814 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 PHOSPHO1Q8TCT1 267 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 ISG20Q96AZ6 181 aaKnown RBP17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 KCNC2Q96PR1 638 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 OR51V1Q9H2C8 321 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 OR1A2Q9Y585 309 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 PCDHGB7Q9Y5F8 929 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 MYH3P11055 1940 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 ANGPTL1O95841 491 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 LYNP07948 512 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 HSD3B1P14060 373 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 FBLP22087 321 aaKnown RBP17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 ITGB7P26010 798 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 HSD3B2P26439 372 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 LPCAT4Q643R3 524 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 KRT74Q7RTS7 529 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 TAS2R9Q9NYW1 312 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 AQP12BA6NM10 295 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 G6PDP11413 515 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 RNH1P13489 461 aaKnown RBP17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 DPP6P42658 865 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 UBAP2Q5T6F2 1119 aaKnown RBP17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 AQP12AQ8IXF9 295 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 TCEAL4Q96EI5 215 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 RSL1D1O76021 490 aaKnown RBP17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 GBAP04062 536 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 LINGO3P0C6S8 592 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 TNFRSF4P43489 277 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 RPS15P62841 145 aaKnown RBP17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 DSC3Q14574 896 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 MYBPC3Q14896 1274 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 LACTB2Q53H82 288 aaPredicted RBP17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 FCRL3Q96P31 734 aaPredicted RBP17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 DEFB126Q9BYW3 111 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 TPT1P8Q9HAU6 139 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 CPSF4LA6NMK7 179 aaKnown RBP17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 GP1BBP13224 206 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 LPAL2Q16609 132 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 TMEM130Q8N3G9 435 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 CSNK1A1LQ8N752 337 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 OR52B2Q96RD2 323 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 RNF121Q9H920 327 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 CLEC3AO75596 197 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 RPS6KA3P51812 740 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 AFF1P51825 1210 aaKnown RBP17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 PDCD4Q53EL6 469 aaKnown RBP17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 DNM1P34Q6PK57 102 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 LINC00471Q8N535 108 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 OR5K1Q8NHB7 308 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 GRHL3Q8TE85 626 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 ZDHHC1Q8WTX9 485 aa17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 DAZLQ92904 295 aaKnown RBP17.12■□□□□ 0.33
CDC42EP3-201ENST00000295324 MYH11P35749 1972 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 CD2P06729 351 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 CD1DP15813 335 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 PER3P56645 1201 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 RPA4Q13156 261 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 CRB2Q5IJ48 1285 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 FAM156AQ8NDB6 213 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 OR5M3Q8NGP4 307 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 REEP4Q9H6H4 257 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 A6NCN8 305 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 ZNF860A6NHJ4 632 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 HAT1O14929 419 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 RAB28P51157 221 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 TSPAN33Q86UF1 283 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 B3GAT2Q9NPZ5 323 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 TAF4O00268 1085 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 EIF3FO00303 357 aaPredicted RBP17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 PAX7P23759 505 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 PSMA1P25786 263 aaKnown RBP17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 TBPL1P62380 186 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 DSC1Q08554 894 aa17.11■□□□□ 0.33
CDC42EP3-201ENST00000295324 LASP1Q14847 261 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms