RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 QPCTLQ9NXS2 382 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 MAPRE3Q9UPY8 281 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 DLGAP4Q9Y2H0 992 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 LYVE1Q9Y5Y7 322 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 PRSS21Q9Y6M0 314 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 IGLV3-16A0A075B6K0 115 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 M0R082 166 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 FFAR3O14843 346 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 GPR42O15529 346 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 PDYNP01213 254 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 C8GP07360 202 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 MPC1LP0DKB6 136 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 GATMP50440 423 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 LIMK1P53667 647 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 ELP6Q0PNE2 266 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 ELOAQ14241 798 aaKnown RBP10.03□□□□□ -0.8
SKA1-201ENST00000285116 TBCEQ15813 527 aaPredicted RBP10.03□□□□□ -0.8
SKA1-201ENST00000285116 TIGD6Q17RP2 521 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 NEK5Q6P3R8 708 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 SLC46A3Q7Z3Q1 461 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 FAM217AQ8IXS0 508 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 KLHDC8AQ8IYD2 350 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 NXPE1Q8N323 547 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 PSD4Q8NDX1 1056 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 TRMT2BQ96GJ1 504 aaKnown RBP10.03□□□□□ -0.8
SKA1-201ENST00000285116 HRASLS5Q96KN8 279 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 B3GALT6Q96L58 329 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 RAD9AQ99638 391 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 INPP5KQ9BT40 448 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 SLC12A9Q9BXP2 914 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 ZFYVE1Q9HBF4 777 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 ZFP14Q9HCL3 533 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 AASDHPPTQ9NRN7 309 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 TAS2R9Q9NYW1 312 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 ABCG2Q9UNQ0 655 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 A0A1W2PQ67 120 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 ICMTO60725 284 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 KCNK5O95279 499 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 PRAMEF12O95522 483 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 RRM2P31350 389 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 TUFMP49411 452 aaKnown RBP10.03□□□□□ -0.8
SKA1-201ENST00000285116 CSTF3Q12996 717 aaKnown RBP10.03□□□□□ -0.8
SKA1-201ENST00000285116 DUSP4Q13115 394 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 MBTPS1Q14703 1052 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 DUSP7Q16829 419 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 SLC8B1Q6J4K2 584 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 FUT10Q6P4F1 479 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 VN1R5Q7Z5H4 357 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 CAMKMTQ7Z624 323 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 CCDC190Q86UF4 302 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 JPH3Q8WXH2 748 aaPredicted RBP10.03□□□□□ -0.8
SKA1-201ENST00000285116 BHMTQ93088 406 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 BOCQ9BWV1 1114 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 IRF2BPLQ9H1B7 796 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 CHST8Q9H2A9 424 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 ASB8Q9H765 288 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 PAQR5Q9NXK6 330 aaPredicted RBP10.03□□□□□ -0.8
SKA1-201ENST00000285116 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.03□□□□□ -0.8
SKA1-201ENST00000285116 CORO2BQ9UQ03 480 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 PCDHB9Q9Y5E1 797 aa10.03□□□□□ -0.8
SKA1-201ENST00000285116 HMX3A6NHT5 357 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 NT5C1B-RDH14C9J2C7 533 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 RFXANKO14593 260 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 SSX4O60224 188 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 SCN2BO60939 215 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 WBP4O75554 376 aaKnown RBP10.02□□□□□ -0.81
SKA1-201ENST00000285116 SEMA3DO95025 777 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 GJB5O95377 273 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 GUCA1CO95843 209 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 C9P02748 559 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 SYN1P17600 705 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 AMD1P17707 334 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 PPIBP23284 216 aaKnown RBP10.02□□□□□ -0.81
SKA1-201ENST00000285116 PTX3P26022 381 aaPredicted RBP10.02□□□□□ -0.81
SKA1-201ENST00000285116 KDELR2P33947 212 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 SPAM1P38567 509 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 RHOAP61586 193 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 LRRC26Q2I0M4 334 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 HKDC1Q2TB90 917 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 BCL7AQ4VC05 210 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 NXNL2Q5VZ03 156 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.02□□□□□ -0.81
SKA1-201ENST00000285116 ZNF517Q6ZMY9 492 aaPredicted RBP10.02□□□□□ -0.81
SKA1-201ENST00000285116 PTOV1Q86YD1 416 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 RAB43Q86YS6 212 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 IQCF2Q8IXL9 164 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 SYNPOQ8N3V7 929 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 PAF1Q8N7H5 531 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 CASD1Q96PB1 797 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 GDF15Q99988 308 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 COPS4Q9BT78 406 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 RASSF1Q9NS23 344 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 SRRDQ9UH36 339 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 TRAPPC4Q9Y296 219 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 PADI2Q9Y2J8 665 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 PPIL1Q9Y3C6 166 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 PIKFYVEQ9Y2I7 2098 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 GLYATL1P3A0A0U1RQE8 302 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 LOC105371267A0A1B0GV96 52 aa10.02□□□□□ -0.81
SKA1-201ENST00000285116 ARVCFO00192 962 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms