RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 PTHP01270 115 aa8.8□□□□□ -1
MSH4-201ENST00000263187 IGFBP1P08833 259 aaPredicted RBP8.8□□□□□ -1
MSH4-201ENST00000263187 GSTT2P0CG29 244 aa8.8□□□□□ -1
MSH4-201ENST00000263187 GSTT2BP0CG30 244 aa8.8□□□□□ -1
MSH4-201ENST00000263187 ITGAMP11215 1152 aa8.8□□□□□ -1
MSH4-201ENST00000263187 PRPS2P11908 318 aa8.8□□□□□ -1
MSH4-201ENST00000263187 SRCP12931 536 aa8.8□□□□□ -1
MSH4-201ENST00000263187 TGM1P22735 817 aa8.8□□□□□ -1
MSH4-201ENST00000263187 CD40LGP29965 261 aa8.8□□□□□ -1
MSH4-201ENST00000263187 PTGER1P34995 402 aa8.8□□□□□ -1
MSH4-201ENST00000263187 TGM4P49221 684 aa8.8□□□□□ -1
MSH4-201ENST00000263187 STARD3Q14849 445 aa8.8□□□□□ -1
MSH4-201ENST00000263187 RFX4Q33E94 735 aa8.8□□□□□ -1
MSH4-201ENST00000263187 PLEKHG6Q3KR16 790 aa8.8□□□□□ -1
MSH4-201ENST00000263187 LEXMQ3ZCV2 418 aa8.8□□□□□ -1
MSH4-201ENST00000263187 BCDIN3DQ7Z5W3 292 aaKnown RBP8.8□□□□□ -1
MSH4-201ENST00000263187 TMPRSS11BQ86T26 416 aa8.8□□□□□ -1
MSH4-201ENST00000263187 THOC6Q86W42 341 aaKnown RBP8.8□□□□□ -1
MSH4-201ENST00000263187 STX19Q8N4C7 294 aa8.8□□□□□ -1
MSH4-201ENST00000263187 IL4I1Q96RQ9 567 aa8.8□□□□□ -1
MSH4-201ENST00000263187 OR51B5Q9H339 312 aa8.8□□□□□ -1
MSH4-201ENST00000263187 SUV39H2Q9H5I1 410 aa8.8□□□□□ -1
MSH4-201ENST00000263187 EXOSC4Q9NPD3 245 aaKnown RBP8.8□□□□□ -1
MSH4-201ENST00000263187 M0QX08 132 aa8.8□□□□□ -1
MSH4-201ENST00000263187 M0R082 166 aa8.8□□□□□ -1
MSH4-201ENST00000263187 CA12O43570 354 aa8.8□□□□□ -1
MSH4-201ENST00000263187 SLC16A8O95907 504 aa8.8□□□□□ -1
MSH4-201ENST00000263187 C1SP09871 688 aa8.8□□□□□ -1
MSH4-201ENST00000263187 HLA-EP13747 358 aa8.8□□□□□ -1
MSH4-201ENST00000263187 ATP1B2P14415 290 aaPredicted RBP8.8□□□□□ -1
MSH4-201ENST00000263187 PRPS1L1P21108 318 aa8.8□□□□□ -1
MSH4-201ENST00000263187 HLA-FP30511 346 aa8.8□□□□□ -1
MSH4-201ENST00000263187 SERPINB1P30740 379 aa8.8□□□□□ -1
MSH4-201ENST00000263187 TGFBR2P37173 567 aa8.8□□□□□ -1
MSH4-201ENST00000263187 CTSCP53634 463 aa8.8□□□□□ -1
MSH4-201ENST00000263187 RPS13P62277 151 aaKnown RBP8.8□□□□□ -1
MSH4-201ENST00000263187 ILF2Q12905 390 aaKnown RBP8.8□□□□□ -1
MSH4-201ENST00000263187 EXOC3L2Q2M3D2 409 aa8.8□□□□□ -1
MSH4-201ENST00000263187 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.8□□□□□ -1
MSH4-201ENST00000263187 C6orf183Q5T699 404 aa8.8□□□□□ -1
MSH4-201ENST00000263187 SYT6Q5T7P8 510 aaPredicted RBP8.8□□□□□ -1
MSH4-201ENST00000263187 STEAP3Q658P3 488 aa8.8□□□□□ -1
MSH4-201ENST00000263187 NFKBIDQ8NI38 313 aa8.8□□□□□ -1
MSH4-201ENST00000263187 RAET1EQ8TD07 263 aa8.8□□□□□ -1
MSH4-201ENST00000263187 SLC29A3Q9BZD2 475 aa8.8□□□□□ -1
MSH4-201ENST00000263187 TPK1Q9H3S4 243 aa8.8□□□□□ -1
MSH4-201ENST00000263187 RPS6KA6Q9UK32 745 aa8.8□□□□□ -1
MSH4-201ENST00000263187 ITM2BQ9Y287 266 aa8.8□□□□□ -1
MSH4-201ENST00000263187 PCDHGA4Q9Y5G9 962 aa8.8□□□□□ -1
MSH4-201ENST00000263187 TRBV5-4A0A0C4DH59 114 aa8.79□□□□□ -1
MSH4-201ENST00000263187 OR2A25A4D2G3 310 aa8.79□□□□□ -1
MSH4-201ENST00000263187 ARHGEF33A8MVX0 844 aa8.79□□□□□ -1
MSH4-201ENST00000263187 NEDD8-MDP1E9PL57 170 aa8.79□□□□□ -1
MSH4-201ENST00000263187 PCDH17O14917 1159 aa8.79□□□□□ -1
MSH4-201ENST00000263187 TSPAN6O43657 245 aa8.79□□□□□ -1
MSH4-201ENST00000263187 TPST2O60704 377 aa8.79□□□□□ -1
MSH4-201ENST00000263187 SCN2BO60939 215 aa8.79□□□□□ -1
MSH4-201ENST00000263187 SOX14O95416 240 aa8.79□□□□□ -1
MSH4-201ENST00000263187 C6orf47O95873 294 aa8.79□□□□□ -1
MSH4-201ENST00000263187 ALDH1A1P00352 501 aa8.79□□□□□ -1
MSH4-201ENST00000263187 AZGP1P25311 298 aaKnown RBP8.79□□□□□ -1
MSH4-201ENST00000263187 PSMA3P25788 255 aa8.79□□□□□ -1
MSH4-201ENST00000263187 MAGEA2P43356 314 aa8.79□□□□□ -1
MSH4-201ENST00000263187 CSNK1DP48730 415 aa8.79□□□□□ -1
MSH4-201ENST00000263187 PRIM2P49643 509 aa8.79□□□□□ -1
MSH4-201ENST00000263187 KCNJ10P78508 379 aa8.79□□□□□ -1
MSH4-201ENST00000263187 ELAVL2Q12926 359 aaKnown RBP8.79□□□□□ -1
MSH4-201ENST00000263187 ACOX1Q15067 660 aa8.79□□□□□ -1
MSH4-201ENST00000263187 KCNJ8Q15842 424 aa8.79□□□□□ -1
MSH4-201ENST00000263187 SYTL3Q4VX76 610 aa8.79□□□□□ -1
MSH4-201ENST00000263187 ZNF385BQ569K4 471 aa8.79□□□□□ -1
MSH4-201ENST00000263187 TMEM53Q6P2H8 277 aa8.79□□□□□ -1
MSH4-201ENST00000263187 USP45Q70EL2 814 aa8.79□□□□□ -1
MSH4-201ENST00000263187 SZRD1Q7Z422 152 aa8.79□□□□□ -1
MSH4-201ENST00000263187 HSD11B1LQ7Z5J1 315 aa8.79□□□□□ -1
MSH4-201ENST00000263187 FAM124AQ86V42 546 aa8.79□□□□□ -1
MSH4-201ENST00000263187 CD99L2Q8TCZ2 262 aa8.79□□□□□ -1
MSH4-201ENST00000263187 GGHQ92820 318 aa8.79□□□□□ -1
MSH4-201ENST00000263187 OTUB1Q96FW1 271 aaPredicted RBP8.79□□□□□ -1
MSH4-201ENST00000263187 SLC12A9Q9BXP2 914 aa8.79□□□□□ -1
MSH4-201ENST00000263187 PALMDQ9NP74 551 aa8.79□□□□□ -1
MSH4-201ENST00000263187 ERVK13-1Q9NX77 482 aa8.79□□□□□ -1
MSH4-201ENST00000263187 C5AR2Q9P296 337 aa8.79□□□□□ -1
MSH4-201ENST00000263187 RAB23Q9ULC3 237 aa8.79□□□□□ -1
MSH4-201ENST00000263187 SH2B3Q9UQQ2 575 aa8.79□□□□□ -1
MSH4-201ENST00000263187 MAN2B2Q9Y2E5 1009 aa8.79□□□□□ -1
MSH4-201ENST00000263187 PRKAB1Q9Y478 270 aa8.79□□□□□ -1
MSH4-201ENST00000263187 OXSR1O95747 527 aaPredicted RBP8.79□□□□□ -1
MSH4-201ENST00000263187 C9P02748 559 aa8.79□□□□□ -1
MSH4-201ENST00000263187 ADRA2AP08913 450 aa8.79□□□□□ -1
MSH4-201ENST00000263187 CKMT1AP12532 417 aa8.79□□□□□ -1
MSH4-201ENST00000263187 CYP2A7P20853 494 aa8.79□□□□□ -1
MSH4-201ENST00000263187 HBA1P69905 142 aa8.79□□□□□ -1
MSH4-201ENST00000263187 ST3GAL4Q11206 333 aa8.79□□□□□ -1
MSH4-201ENST00000263187 SMARCB1Q12824 385 aa8.79□□□□□ -1
MSH4-201ENST00000263187 DOC2BQ14184 412 aa8.79□□□□□ -1
MSH4-201ENST00000263187 ASTLQ6HA08 431 aaPredicted RBP8.79□□□□□ -1
MSH4-201ENST00000263187 TPRG1Q6ZUI0 275 aa8.79□□□□□ -1
MSH4-201ENST00000263187 GAREM2Q75VX8 874 aa8.79□□□□□ -1
MSH4-201ENST00000263187 EIF3MQ7L2H7 374 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms