RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ROBO3Q96MS0 1386 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 DISC1C4P0D8 188 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 DIRAS1O95057 198 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 RCBTB2O95199 551 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 STOMP27105 288 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 DGKQP52824 942 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 CREB5Q02930 508 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 DECR1Q16698 335 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 LRRC37A5PQ49AS3 106 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 PHC2Q8IXK0 858 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 ZNF431Q8TF32 576 aaPredicted RBP13.88□□□□□ -0.19
CUX2-201ENST00000261726 SCLYQ96I15 445 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 ITPAQ9BY32 194 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 DCSTAMPQ9H295 470 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 EBF2Q9HAK2 575 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 DPY19L1Q2PZI1 675 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 ANKDD1AQ495B1 522 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 TMBIM1Q969X1 311 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 CMTM7Q96FZ5 175 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 MEAF6Q9HAF1 191 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 THUMPD1Q9NXG2 353 aaKnown RBP13.88□□□□□ -0.19
CUX2-201ENST00000261726 OAZ3Q9UMX2 235 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 A0A1W2PQ45 241 aaPredicted RBP13.88□□□□□ -0.19
CUX2-201ENST00000261726 A0A1W2PQY0 241 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 SLC22A1O15245 554 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 CASP7P55210 303 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 ST3GAL4Q11206 333 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 SPIN4Q56A73 249 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 EIF5AL1Q6IS14 154 aaKnown RBP13.88□□□□□ -0.19
CUX2-201ENST00000261726 CEACAM20Q6UY09 585 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 COMTD1Q86VU5 262 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 LRRC58Q96CX6 371 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 HSPBAP1Q96EW2 488 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 SH3YL1Q96HL8 342 aaPredicted RBP13.88□□□□□ -0.19
CUX2-201ENST00000261726 ZDHHC3Q9NYG2 299 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 KLK3P07288 261 aaPredicted RBP13.88□□□□□ -0.19
CUX2-201ENST00000261726 E2F1Q01094 437 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 HERC3Q15034 1050 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 CHRNA6Q15825 494 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 LAS2Q8IYD9 372 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 TMEM209Q96SK2 561 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.88□□□□□ -0.19
CUX2-201ENST00000261726 Q9N2J8 555 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 FZD3Q9NPG1 666 aa13.88□□□□□ -0.19
CUX2-201ENST00000261726 C2CD4BA6NLJ0 364 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 WNT7AO00755 349 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 AGR2O95994 175 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 ADH5P11766 374 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 SMPD1P17405 629 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 SEMA3AQ14563 771 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 TPRG1LQ5T0D9 272 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 GRHL2Q6ISB3 625 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 ANKRD23Q86SG2 305 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 MAFIPQ8WZ33 124 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 AKTIPQ9H8T0 292 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 ROBO1Q9Y6N7 1651 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 ARPC2O15144 300 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 TLX2O43763 284 aaPredicted RBP13.87□□□□□ -0.19
CUX2-201ENST00000261726 SLC26A5P58743 744 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 ID2Q02363 134 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 FAM110CQ1W6H9 321 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 FAM182AQ5T1J6 154 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 SLC2A7Q6PXP3 512 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 TDRPQ86YL5 185 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 TMEM125Q96AQ2 219 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 ZNF717Q9BY31 904 aaPredicted RBP13.87□□□□□ -0.19
CUX2-201ENST00000261726 ZNF358Q9NW07 568 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 RHCGQ9UBD6 479 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 YARS2Q9Y2Z4 477 aaKnown RBP13.87□□□□□ -0.19
CUX2-201ENST00000261726 TRAV6A0A075B6T7 132 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 AGPSO00116 658 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 ITM2AO43736 263 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 IFNA2P01563 188 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 HLA-DQB2P05538 268 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 MATN1P21941 496 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 VIPR1P32241 457 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 LACTB2Q53H82 288 aaPredicted RBP13.87□□□□□ -0.19
CUX2-201ENST00000261726 ZNF517Q6ZMY9 492 aaPredicted RBP13.87□□□□□ -0.19
CUX2-201ENST00000261726 ADGRD2Q7Z7M1 963 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 LRRTM4Q86VH4 590 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 THOC6Q86W42 341 aaKnown RBP13.87□□□□□ -0.19
CUX2-201ENST00000261726 TBC1D15Q8TC07 691 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 KLRG1Q96E93 195 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 CMKLR1Q99788 373 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 CFL2Q9Y281 166 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 TMEM98Q9Y2Y6 226 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 PCDHB14Q9Y5E9 798 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 CCDC163A0A0D9SF12 145 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 M0R2N6 131 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 MRPL3P09001 348 aaKnown RBP13.87□□□□□ -0.19
CUX2-201ENST00000261726 GSTM3P21266 225 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 BNIP3Q12983 259 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 PON3Q15166 354 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 VMACQ2NL98 169 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 SLC35F1Q5T1Q4 408 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 MBLAC2Q68D91 279 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 DNAJB7Q7Z6W7 309 aaPredicted RBP13.87□□□□□ -0.19
CUX2-201ENST00000261726 SHKBP1Q8TBC3 707 aa13.87□□□□□ -0.19
CUX2-201ENST00000261726 CPNE2Q96FN4 548 aaPredicted RBP13.87□□□□□ -0.19
CUX2-201ENST00000261726 GKN1Q9NS71 199 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms