RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SEC14L3Q9UDX4 400 aa9.78□□□□□ -0.84
PALB2-201ENST00000261584 ASF1AQ9Y294 204 aa9.78□□□□□ -0.84
PALB2-201ENST00000261584 LAMA2P24043 3122 aaKnown RBP9.77□□□□□ -0.84
PALB2-201ENST00000261584 NUPL2O15504 423 aaKnown RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 PCDHGA12O60330 932 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 SEC14L2O76054 403 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 PRKAR2AP13861 404 aaKnown RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 HNF1BP35680 557 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 WASP42768 502 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 FOXM1Q08050 763 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 ABHD18Q0P651 414 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 COX10Q12887 443 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 TUBA3CQ13748 450 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 C16orf62Q7Z3J2 963 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 OR6Q1Q8NGQ2 317 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 RAET1EQ8TD07 263 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 GPR151Q8TDV0 419 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 MRPS31Q92665 395 aaKnown RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 FYTTD1Q96QD9 318 aaKnown RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 HDHD5Q9BXW7 423 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 EMILIN2Q9BXX0 1053 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 MUC13Q9H3R2 512 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 NLKQ9UBE8 527 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 HHLA1C9JL84 531 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 OR7A17O14581 309 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 FRS3O43559 492 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 PCDH7O60245 1069 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 ONECUT3O60422 494 aaPredicted RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 CCNDBP1O95273 360 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 ATP4BP51164 291 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 ATP12AP54707 1039 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 PURAQ00577 322 aaKnown RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 CSTF1Q05048 431 aaKnown RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 XAF1Q6GPH4 301 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 FUT10Q6P4F1 479 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 USP45Q70EL2 814 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 LILRA3Q8N6C8 439 aaPredicted RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 ZNF548Q8NEK5 533 aaPredicted RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 CIDECQ96AQ7 238 aaPredicted RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 NLNQ9BYT8 704 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 MAGEH1Q9H213 219 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 RRAGCQ9HB90 399 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 RANGRFQ9HD47 186 aaPredicted RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 ELOVL2Q9NXB9 296 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 ZNF224Q9NZL3 707 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 CRNNQ9UBG3 495 aaPredicted RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 VPS29Q9UBQ0 182 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 PCDHGB6Q9Y5F9 930 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 RP1L1Q8IWN7 2480 aaPredicted RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 COL2A1P02458 1487 aaPredicted RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 IQCMA0A1B0GVH7 501 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 A0A1B0GVM2 712 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 SLC38A8A6NNN8 435 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 ADAM12O43184 909 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 PRSS23O95084 383 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 CATP04040 527 aaKnown RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 MMP2P08253 660 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 PEPDP12955 493 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 CNR2P34972 360 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 SPAM1P38567 509 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 SLC19A1P41440 591 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 HTR2BP41595 481 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 SCARB2Q14108 478 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 IQCCQ4KMZ1 466 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 ZMAT1Q5H9K5 638 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 C10orf62Q5T681 223 aaPredicted RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 NADSYN1Q6IA69 706 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 BEND5Q7L4P6 421 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 GLCCI1Q86VQ1 547 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 ASCC1Q8N9N2 400 aaKnown RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 C17orf50Q8WW18 174 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 KCNJ9Q92806 393 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 C11orf24Q96F05 449 aaPredicted RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 FCRL4Q96PJ5 515 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 MACROD1Q9BQ69 325 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 YTHDF1Q9BYJ9 559 aaKnown RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 POLR2J3Q9H1A7 115 aaKnown RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 SERHL2Q9H4I8 314 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 SERHLQ9NQF3 203 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 MRPL15Q9P015 296 aaKnown RBP9.77□□□□□ -0.85
PALB2-201ENST00000261584 CLCA2Q9UQC9 943 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 DHRS7Q9Y394 339 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 PCDHGB3Q9Y5G1 929 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 PEX16Q9Y5Y5 336 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 KCNE2Q9Y6J6 123 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 SPTBP11277 2137 aa9.77□□□□□ -0.85
PALB2-201ENST00000261584 KIAA1217Q5T5P2 1943 aa9.76□□□□□ -0.85
PALB2-201ENST00000261584 FADS2P1A8MWK0 482 aa9.76□□□□□ -0.85
PALB2-201ENST00000261584 RFXAPO00287 272 aa9.76□□□□□ -0.85
PALB2-201ENST00000261584 HAT1O14929 419 aa9.76□□□□□ -0.85
PALB2-201ENST00000261584 CCNB2O95067 398 aa9.76□□□□□ -0.85
PALB2-201ENST00000261584 IFNW1P05000 195 aa9.76□□□□□ -0.85
PALB2-201ENST00000261584 TAS2R50P59544 299 aa9.76□□□□□ -0.85
PALB2-201ENST00000261584 ISL1P61371 349 aa9.76□□□□□ -0.85
PALB2-201ENST00000261584 RPL6Q02878 288 aaKnown RBP9.76□□□□□ -0.85
PALB2-201ENST00000261584 TIMM50Q3ZCQ8 353 aa9.76□□□□□ -0.85
PALB2-201ENST00000261584 RTP2Q5QGT7 225 aa9.76□□□□□ -0.85
PALB2-201ENST00000261584 SLC35F1Q5T1Q4 408 aa9.76□□□□□ -0.85
PALB2-201ENST00000261584 SLC16A10Q8TF71 515 aa9.76□□□□□ -0.85
PALB2-201ENST00000261584 SLC9A6Q92581 669 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms