RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 GK3PQ14409 553 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 ASTE1Q2TB18 679 aaPredicted RBP12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 PKDCCQ504Y2 493 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 METTL25Q8N6Q8 603 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 PQLC3Q8N755 202 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 MDM1Q8TC05 714 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 ZNF382Q96SR6 550 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 SEPHS2Q99611 448 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 LYVE1Q9Y5Y7 322 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 KAT6AQ92794 2004 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 BHMG1C9JSJ3 638 aaPredicted RBP12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 AGRPO00253 132 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 TULP2O00295 520 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 EMC8O43402 210 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 CDH1P12830 882 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 ACADLP28330 430 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 GNALP38405 381 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 PTPRCAPQ14761 206 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 TERF2Q15554 542 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 CCDC80Q76M96 950 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 GPRIN1Q7Z2K8 1008 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 LRRC25Q8N386 305 aaPredicted RBP12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 RBP7Q96R05 134 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 CDRT15Q96T59 188 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 DPH2Q9BQC3 489 aaPredicted RBP12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 ANKZF1Q9H8Y5 726 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 PLEKHA1Q9HB21 404 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 PRSS16Q9NQE7 514 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 TMLHEQ9NVH6 421 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 SLCO3A1Q9UIG8 710 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 R3HDM2Q9Y2K5 976 aaKnown RBP12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 SAMHD1Q9Y3Z3 626 aaKnown RBP12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 B4GALT2O60909 372 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 LRATO95237 230 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 MT-CO1P00395 513 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 GPIP06744 558 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 HTR3AP46098 478 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 MRPL58Q14197 206 aaKnown RBP12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 GAL3ST3Q96A11 431 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 CRB3Q9BUF7 120 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 STMN3Q9NZ72 180 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 PCDHGA5Q9Y5G8 931 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 PRKCGP05129 697 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 XIAPP98170 497 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 INAQ16352 499 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 LIN52Q52LA3 116 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 TAS1R1Q7RTX1 841 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 LMO3Q8TAP4 145 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 GORASP1Q9BQQ3 440 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 TRIM2Q9C040 744 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 BATF3Q9NR55 127 aa12.97□□□□□ -0.33
PRPF38A-201ENST00000257181 WDR90Q96KV7 1748 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 GSC2O15499 205 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 CHRM1P11229 460 aaPredicted RBP12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 RPL10P27635 214 aaKnown RBP12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 NSDHLQ15738 373 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 EGFLAMQ63HQ2 1017 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 CMC1Q7Z7K0 106 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 AP3S1Q92572 193 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 FIZ1Q96SL8 496 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 C1orf50Q9BV19 199 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 CAB39LQ9H9S4 337 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 RDH14Q9HBH5 336 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 IKZF3Q9UKT9 509 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 HNRNPLP14866 589 aaKnown RBP eCLIP12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 ZNF28P17035 718 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 GPR153Q6NV75 609 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 EDEM2Q9BV94 578 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 ARL8BQ9NVJ2 186 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 EIF3KQ9UBQ5 218 aaKnown RBP12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 MAU2Q9Y6X3 613 aa12.96□□□□□ -0.33
PRPF38A-201ENST00000257181 SLC9B1P1A6NJY1 282 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 HOXD9P28356 352 aaPredicted RBP12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 HOXD13P35453 343 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 ST13P50502 369 aaKnown RBP12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 C1orf61Q13536 156 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 PWP1Q13610 501 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 EXT1Q16394 746 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 GPR141Q7Z602 305 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 PLEKHO2Q8TD55 490 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 EEF1AKMT1Q8WVE0 214 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 EMC3Q9P0I2 261 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 MRPS2Q9Y399 296 aaKnown RBP12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 NOP16Q9Y3C1 178 aaKnown RBP12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 IL33O95760 270 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 CD2P06729 351 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 PORP16435 677 aaPredicted RBP12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 PTGIRP43119 386 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 ABCG1P45844 678 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 PPP3R1P63098 170 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 PAMR1Q6UXH9 720 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 RELL1Q8IUW5 271 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 DND1Q8IYX4 353 aaKnown RBP12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 GALNT4Q8N4A0 578 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 TCEAL4Q96EI5 215 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 FAM84AQ96KN4 292 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 CDH22Q9UJ99 828 aa12.96□□□□□ -0.34
PRPF38A-201ENST00000257181 CCNB2O95067 398 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 METTL18O95568 372 aa12.95□□□□□ -0.34
PRPF38A-201ENST00000257181 PENKP01210 267 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms