RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 ALKBH4Q9NXW9 302 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 DLGAP4Q9Y2H0 992 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 DPPA5A6NC42 116 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 BCAS2O75934 225 aaPredicted RBP18.37■□□□□ 0.53
PTPRE-201ENST00000254667 CKMT2P17540 419 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 ETV3P41162 512 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 RAB2AP61019 212 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 SGCBQ16585 318 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 MORN1Q5T089 497 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 TXNDC5Q8NBS9 432 aaKnown RBP18.37■□□□□ 0.53
PTPRE-201ENST00000254667 PKP4Q99569 1192 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 PHF24Q9UPV7 400 aa18.37■□□□□ 0.53
PTPRE-201ENST00000254667 SLC22A1O15245 554 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 RBMXL2O75526 392 aaKnown RBP18.36■□□□□ 0.53
PTPRE-201ENST00000254667 FGF3P11487 239 aaPredicted RBP18.36■□□□□ 0.53
PTPRE-201ENST00000254667 GKP32189 559 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 ABATP80404 500 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 FAM214AQ32MH5 1076 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 CCDC80Q76M96 950 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 ERMP1Q7Z2K6 904 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 PHTF2Q8N3S3 785 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 STRA6Q9BX79 667 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 MVB12BQ9H7P6 319 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 NFS1Q9Y697 457 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 FAM170BA6NMN3 283 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 FAM189A1O60320 539 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 MATN1P21941 496 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 MXD1Q05195 221 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 SNTA1Q13424 505 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 TYSND1Q2T9J0 566 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 TECRLQ5HYJ1 363 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 PDSS1Q5T2R2 415 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 ZUFSPQ96AP4 578 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 TMCO6Q96DC7 493 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 KXD1Q9BQD3 176 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 CYTH4Q9UIA0 394 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 PRDM4Q9UKN5 801 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 DNAJC25-GNG10A0A024R161 153 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 M0QZQ0 153 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 PEX12O00623 359 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 TCEA1P23193 301 aaKnown RBP18.36■□□□□ 0.53
PTPRE-201ENST00000254667 BMP8BP34820 402 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 ALDH3A2P51648 485 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 KLHL26Q53HC5 615 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 RNASE12Q5GAN4 147 aaKnown RBP18.36■□□□□ 0.53
PTPRE-201ENST00000254667 BMP8AQ7Z5Y6 402 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 TMEM135Q86UB9 458 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 GPALPP1Q8IXQ4 340 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 KLHL6Q8WZ60 621 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 PIGKQ92643 395 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 HSH2DQ96JZ2 352 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 NECTIN4Q96NY8 510 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 SLC39A3Q9BRY0 314 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 ZNF395Q9H8N7 513 aaPredicted RBP18.36■□□□□ 0.53
PTPRE-201ENST00000254667 TM9SF3Q9HD45 589 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 TMEM5Q9Y2B1 443 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 EFCAB9A8MZ26 197 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 TBX10O75333 385 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 C1GALT1C1LP0DN25 315 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 FMO3P31513 532 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 PITX1P78337 314 aaPredicted RBP18.36■□□□□ 0.53
PTPRE-201ENST00000254667 SYT16Q17RD7 645 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 RTP2Q5QGT7 225 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 EGFLAMQ63HQ2 1017 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 SYVN1Q86TM6 617 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 HTRA1Q92743 480 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 RIMKLBQ9ULI2 386 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 VLDLRP98155 873 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 NPTX1Q15818 432 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 REEP3Q6NUK4 255 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 OR4K17Q8NGC6 315 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 FCRL3Q96P31 734 aaPredicted RBP18.36■□□□□ 0.53
PTPRE-201ENST00000254667 MCCC2Q9HCC0 563 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 IFT46Q9NQC8 304 aa18.36■□□□□ 0.53
PTPRE-201ENST00000254667 MAN2B1O00754 1011 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 C6orf47O95873 294 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 UQCRC2P22695 453 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 PROKR2Q8NFJ6 384 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 BIRC7Q96CA5 298 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 KCNA7Q96RP8 456 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 TNFRSF10DQ9UBN6 386 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 PTGESO14684 152 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 KIAA1161Q6NSJ0 714 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 ZDHHC12Q96GR4 267 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 KCNC2Q96PR1 638 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 ETAA1Q9NY74 926 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 S1PR4O95977 384 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 STK19P49842 368 aaPredicted RBP18.35■□□□□ 0.53
PTPRE-201ENST00000254667 SEPHS1P49903 392 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 CBX3Q13185 183 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 SUSD1Q6UWL2 747 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 NRROSQ86YC3 692 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 ZNF676Q8N7Q3 588 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 OR9I1Q8NGQ6 314 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 SEC14L1Q92503 715 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 PGAP3Q96FM1 320 aaPredicted RBP18.35■□□□□ 0.53
PTPRE-201ENST00000254667 GTPBP2Q9BX10 602 aaKnown RBP18.35■□□□□ 0.53
PTPRE-201ENST00000254667 FBRSQ9HAH7 460 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 SETD1AO15047 1707 aaKnown RBP18.35■□□□□ 0.53
PTPRE-201ENST00000254667 PCDHGA12O60330 932 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms