RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 EOGTQ5NDL2 527 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 GALNT15Q8N3T1 639 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 JAGN1Q8N5M9 183 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 SUN3Q8TAQ9 357 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 SHISA4Q96DD7 197 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 PEX16Q9Y5Y5 336 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 SOD2P04179 222 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 VSX2P58304 361 aaPredicted RBP18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 TMEM164Q5U3C3 297 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 GEMIN6Q8WXD5 167 aaKnown RBP18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 ASB9Q96DX5 294 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 TPT1P8Q9HAU6 139 aa18.12■□□□□ 0.49
SMARCC1-201ENST00000254480 COL1A1P02452 1464 aaPredicted RBP18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 TCRBV21S2A2A0A5A6 115 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 RASGEF1BQ0VAM2 473 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 ZNF267Q14586 743 aaPredicted RBP18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 UPP1Q16831 310 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 OR2T5Q6IEZ7 315 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 OR2T29Q8NH02 315 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 KLHL6Q8WZ60 621 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 FBXL20Q96IG2 436 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 TNFRSF10DQ9UBN6 386 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 GNG8Q9UK08 70 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 CLDN25C9JDP6 229 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 RHOP08100 348 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 CHRM1P11229 460 aaPredicted RBP18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 ANXA8P13928 327 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 CASRP41180 1078 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 TYSND1Q2T9J0 566 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 PDCD4Q53EL6 469 aaKnown RBP18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 CCDC116Q8IYX3 515 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 FCRL3Q96P31 734 aaPredicted RBP18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 DNAJC27Q9NZQ0 273 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 EIF3KQ9UBQ5 218 aaKnown RBP18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 CDC14AQ9UNH5 594 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 KMOO15229 486 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 OAZ2O95190 189 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 APOL3O95236 402 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 GLDCP23378 1020 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 AP3S2P59780 193 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 C4orf46Q504U0 113 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 USP43Q70EL4 1123 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 SNX29P2Q8IUI4 249 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 TMEM126BQ8IUX1 230 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 OR8K3Q8NH51 312 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 SMURF2Q9HAU4 748 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 NPIPA5E9PKD4 350 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 H3BNX3 289 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 RFPL2O75678 378 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 MRPL3P09001 348 aaKnown RBP18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 NDUFS1P28331 727 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 AP1S2P56377 157 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 RAB2AP61019 212 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 ADAM17P78536 824 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 RAB6CQ53S08 254 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 QSOX2Q6ZRP7 698 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 WDR77Q9BQA1 342 aaPredicted RBP18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 RAB6CQ9H0N0 254 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 TTYH1Q9H313 450 aaPredicted RBP18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 NPIPA1Q9UND3 350 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 SQORQ9Y6N5 450 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 A0A1W2PRQ8 180 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 SCGB1D2O95969 90 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 EEFSECP57772 596 aaKnown RBP18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 LMAN2Q12907 356 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 DNAJA4Q8WW22 397 aaPredicted RBP18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 IL17FQ96PD4 163 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 MAF1Q9H063 256 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 PFDN2Q9UHV9 154 aa18.11■□□□□ 0.49
SMARCC1-201ENST00000254480 MEP1AQ16819 746 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 KRTCAP2Q8N6L1 136 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 OR9A1PQ8NGU1 263 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 C1orf216Q8TAB5 229 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 PXYLP1Q8TE99 480 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 IGSF21Q96ID5 467 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 CD244Q9BZW8 370 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 ANKRA2Q9H9E1 313 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 PCDHB11Q9Y5F2 797 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 MYADML2A6NDP7 307 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 TSPAN6O43657 245 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 TXNDC5Q8NBS9 432 aaKnown RBP18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 IRF7Q92985 503 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 MMABQ96EY8 250 aaPredicted RBP18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 HRASLS2Q9NWW9 162 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 ZSCAN5BA6NJL1 495 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 E7EQ34 232 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 LDOC1O95751 146 aaPredicted RBP18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 DIO3P55073 304 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 GPAT4Q86UL3 456 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 AMIGO1Q86WK6 493 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 DCAF4L2Q8NA75 395 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 FETUBQ9UGM5 382 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 ZNF878C9JN71 531 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 K7ERQ8 282 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 CREG1O75629 220 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 CNPY1Q3B7I2 92 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 TRIB2Q92519 343 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 BIRC7Q96CA5 298 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 DERL2Q9GZP9 239 aa18.1■□□□□ 0.49
SMARCC1-201ENST00000254480 Q9N2J8 555 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms