RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 RETP07949 1114 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 EBLN1P0CF75 366 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 RYKP34925 604 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 CLDN8P56748 225 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 FUT10Q6P4F1 479 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 TNFAIP8L2Q6P589 184 aaPredicted RBP11.56□□□□□ -0.56
USHBP1-201ENST00000252597 SNX20Q7Z614 316 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 TMCO2Q7Z6W1 182 aaPredicted RBP11.56□□□□□ -0.56
USHBP1-201ENST00000252597 LILRA3Q8N6C8 439 aaPredicted RBP11.56□□□□□ -0.56
USHBP1-201ENST00000252597 OR9Q1Q8NGQ5 310 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 GGHQ92820 318 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 DUSP21Q9H596 190 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 PCDHGB6Q9Y5F9 930 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 IGLV3-10A0A075B6K4 115 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 A0A0G2JN53 185 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 STC2O76061 302 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 KCNK5O95279 499 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 C9P02748 559 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 HOXA9P31269 272 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 CCR7P32248 378 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 FLT3LGP49771 235 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 SNRPD2P62316 118 aaKnown RBP11.56□□□□□ -0.56
USHBP1-201ENST00000252597 KIAA0040Q15053 153 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 DEFB115Q30KQ5 88 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.56□□□□□ -0.56
USHBP1-201ENST00000252597 SNAP47Q5SQN1 464 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 FAM131AQ6UXB0 335 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 DEF8Q6ZN54 512 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 DEFB128Q7Z7B8 93 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 GALNT7Q86SF2 657 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 ZFP41Q8N8Y5 198 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 GPR26Q8NDV2 337 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 KBTBD8Q8NFY9 601 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 PJA1Q8NG27 643 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 PIH1D2Q8WWB5 315 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 YIPF6Q96EC8 236 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 P2RY13Q9BPV8 354 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 LINC00597Q9H2U6 94 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 SERHLQ9NQF3 203 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 GABRQQ9UN88 632 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 OARD1Q9Y530 152 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 PCDHB7Q9Y5E2 793 aa11.56□□□□□ -0.56
USHBP1-201ENST00000252597 FAM220BPB1ANY3 271 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 PCDH17O14917 1159 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 SLC16A6O15403 523 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 ATF6P18850 670 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 XPAP23025 273 aaPredicted RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 S100A1P23297 94 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 HMGCLP35914 325 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 CASP3P42574 277 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 INPP1P49441 399 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 DUOXA1Q1HG43 343 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 IRAK1BP1Q5VVH5 260 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 USP43Q70EL4 1123 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 SLC24A5Q71RS6 500 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 OLIG3Q7RTU3 272 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 PRSS48Q7RTY5 328 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 TSPYL5Q86VY4 417 aaPredicted RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 DBF4BQ8NFT6 615 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 TMEM246Q9BRR3 403 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 OR51B5Q9H339 312 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 NPIPB15A6NHN6 443 aaPredicted RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 LRRTM2O43300 516 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 OR10H3O60404 316 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 SDHBP21912 280 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 PIK3CBP42338 1070 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 ATN1P54259 1190 aaPredicted RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 CAV3P56539 151 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 PPIGQ13427 754 aaKnown RBP eCLIP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 TBRG1Q3YBR2 411 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 COX20Q5RI15 118 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 ADGRF1Q5T601 910 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 SYT6Q5T7P8 510 aaPredicted RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 AQP11Q8NBQ7 271 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 ITPKCQ96DU7 683 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 CNDP2Q96KP4 475 aaKnown RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 MGLLQ99685 303 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 BRD9Q9H8M2 597 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 C5AR2Q9P296 337 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 NEUROG3Q9Y4Z2 214 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 NYNRINQ9P2P1 1898 aaKnown RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 OR2A25A4D2G3 310 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 E7EQ34 232 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 M0R082 166 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 WNT9AO14904 365 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 DYRK3O43781 588 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 CPNE3O75131 537 aaKnown RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 DUSP11O75319 330 aaKnown RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 GSTM1P09488 218 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 MAPK1P28482 360 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 CCND3P30281 292 aaPredicted RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 SLC11A1P49279 550 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 DBPQ10586 325 aaPredicted RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 NFE2L1Q14494 772 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 SPATS1Q496A3 300 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 CCSMST1Q4G0I0 132 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 C10orf62Q5T681 223 aaPredicted RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 VASH1Q7L8A9 365 aaPredicted RBP11.55□□□□□ -0.56
USHBP1-201ENST00000252597 BBS7Q8IWZ6 715 aa11.55□□□□□ -0.56
USHBP1-201ENST00000252597 B3GNT7Q8NFL0 401 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms