RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 BAZ2AQ9UIF9 1905 aaKnown RBP7.31□□□□□ -1.24
RIF1-201ENST00000243326 EDNRBP24530 442 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ARHGEF6Q15052 776 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 OR4D1Q15615 310 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 CARD16Q5EG05 197 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 BRMS1LQ5PSV4 323 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 RTL4Q6ZR62 310 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ATCAYQ86WG3 371 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 ANKRD13BQ86YJ7 626 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 STYXQ8WUJ0 223 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 SPATA7Q9P0W8 599 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 CNTN3Q9P232 1028 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 GTF2IRD1Q9UHL9 959 aa7.31□□□□□ -1.24
RIF1-201ENST00000243326 TBC1D3DA0A087WVF3 549 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 TBC1D3IA0A087WXS9 549 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 TBC1D3EA0A087X179 549 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 TBC1D3KA0A087X1G2 549 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 TBC1D3FA6NER0 549 aaPredicted RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 TBC1D3LB9A6J9 549 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 TBC1D3HP0C7X1 549 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 NAA10P41227 235 aaPredicted RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 TBC1D3GQ6DHY5 549 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 TBC1D3CQ6IPX1 549 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 MED27Q6P2C8 311 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 TBC1D3Q8IZP1 549 aaPredicted RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 LRCH3Q96II8 777 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 ALPK1Q96QP1 1244 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 NLKQ9UBE8 527 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 CLDN7O95471 211 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 SFTPBP07988 381 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 TIE1P35590 1138 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 ACADVLP49748 655 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 STRADAQ7RTN6 431 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 KLBQ86Z14 1044 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 KLHL36Q8N4N3 616 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 MINDY2Q8NBR6 621 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 DNAJA4Q8WW22 397 aaPredicted RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 A6NHS1 94 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 DNAJA1P31689 397 aaKnown RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 KCNQ1P51787 676 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 POLR2LP62875 67 aaKnown RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 RPS26P11Q5JNZ5 115 aaPredicted RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.3□□□□□ -1.243e-10■■■■■ 29
RIF1-201ENST00000243326 THEM6Q8WUY1 208 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 DPAGT1Q9H3H5 408 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 TNFRSF10DQ9UBN6 386 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 SLITRK5O94991 958 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 SLC10A3P09131 477 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 AFF1P51825 1210 aaKnown RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 ERVK-8P63133 956 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 ZNF791Q3KP31 576 aaPredicted RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 CDKL4Q5MAI5 379 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 UBXN11Q5T124 520 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 SERPINA13PQ6UXR4 307 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 PAQR7Q86WK9 346 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 DENND6BQ8NEG7 585 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 SLC38A4Q969I6 547 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 INPP5KQ9BT40 448 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 IL37Q9NZH6 218 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 AGPAT2O15120 278 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 GJB3O75712 270 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 IFNA7P01567 189 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 SDHBP21912 280 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 BCL2L15Q5TBC7 163 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 UCK2Q9BZX2 261 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 XKR8Q9H6D3 395 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 HCN2Q9UL51 889 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 FAM171A2A8MVW0 826 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 APOC3P02656 99 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 CDKN1CP49918 316 aaPredicted RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 OR52E8Q6IFG1 317 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 SPPL2BQ8TCT7 592 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 A0A0A6YYH2 397 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 A6NJ64 397 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 HOXC6P09630 235 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 CDK4P11802 303 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 PEPDP12955 493 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 ETV4P43268 484 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 RPS13P62277 151 aaKnown RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 MBTPS1Q14703 1052 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 GET4Q7L5D6 327 aaPredicted RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 ZNF676Q8N7Q3 588 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 MGME1Q9BQP7 344 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 ZNF226Q9NYT6 803 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 CPQQ9Y646 472 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 A0A1W2PRB8 838 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 ALG1LQ6GMV1 187 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 CHST9Q7L1S5 443 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 ROPN1LQ96C74 230 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 ADAD1Q96M93 576 aaKnown RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 C12orf66Q96MD2 445 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 TAS2R3Q9NYW6 316 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 BCL9O00512 1426 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 CAPN15O75808 1086 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 MAGEA8P43361 318 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 PRKCZQ05513 592 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 ZNF423Q2M1K9 1284 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 NSUN3Q9H649 340 aaKnown RBP7.3□□□□□ -1.24
RIF1-201ENST00000243326 KCNK12Q9HB15 430 aa7.3□□□□□ -1.24
RIF1-201ENST00000243326 DUOX1Q9NRD9 1551 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms