RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TEX51A0A1B0GUA7 166 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 UPK3BL1B0FP48 263 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 UPK3BL2E5RIL1 263 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 H3BN98 237 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 GRID2O43424 1007 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 PRMT3O60678 531 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 TNFP01375 233 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 M6PRP20645 277 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 CTSKP43235 329 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 SCRN3Q0VDG4 424 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 BTBD16Q32M84 506 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 PYDC2Q56P42 97 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 HMBOX1Q6NT76 420 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 PHC2Q8IXK0 858 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 TTC9BQ8N6N2 239 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 PHOSPHO2Q8TCD6 241 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 IPCEF1Q8WWN9 437 aaPredicted RBP10.65□□□□□ -0.7
COPA-201ENST00000241704 BIRC7Q96CA5 298 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 IL37Q9NZH6 218 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 TMEM181Q9P2C4 612 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 CD207Q9UJ71 328 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 HSPB11Q9Y547 144 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 PHIPQ8WWQ0 1821 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 LCHNA4D1U4 455 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 C2orf78A6NCI8 922 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 CHURC1-FNTBB4DL54 471 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 RGS13O14921 159 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 SOCS5O75159 536 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 ECI2O75521 394 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 TRBC1P01850 177 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 HIST1H2ABP04908 130 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 ITPKBP27987 946 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 BUD31P41223 144 aaPredicted RBP10.65□□□□□ -0.7
COPA-201ENST00000241704 VIPR2P41587 438 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 MASP1P48740 699 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 MANFP55145 182 aaKnown RBP10.65□□□□□ -0.7
COPA-201ENST00000241704 STEAP4Q687X5 459 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 HIST3H2AQ7L7L0 130 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 HIST1H2ACQ93077 130 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 CDCA3Q99618 268 aaPredicted RBP10.65□□□□□ -0.7
COPA-201ENST00000241704 MCMBPQ9BTE3 642 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 MAT2BQ9NZL9 334 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 PPIEQ9UNP9 301 aaKnown RBP10.65□□□□□ -0.7
COPA-201ENST00000241704 U3KQV3 271 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 H0YC42 278 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 KRT33AO76009 404 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 ARHGEF15O94989 841 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 KAT7O95251 611 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 SIX3O95343 332 aaPredicted RBP10.65□□□□□ -0.7
COPA-201ENST00000241704 HPRP00739 348 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 TSPAN19P0C672 248 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 TGM1P22735 817 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 IL4RP24394 825 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 NDUFS1P28331 727 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 VIPR1P32241 457 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 IFNGR2P38484 337 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 OR3A3P47888 321 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 GALNT7Q86SF2 657 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 DPP10Q8N608 796 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 NATD1Q8N6N6 113 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 PIGKQ92643 395 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 SNAPC3Q92966 411 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 PPM1MQ96MI6 270 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 HBEGFQ99075 208 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 SPATA5L1Q9BVQ7 753 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 GSDMCQ9BYG8 508 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 TMEM245Q9H330 911 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 ADGRE2Q9UHX3 823 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 PIAS3Q9Y6X2 628 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 SCN9AQ15858 1988 aa10.65□□□□□ -0.7
COPA-201ENST00000241704 COL4A1P02462 1669 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 PI15O43692 258 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 OR1F1O43749 312 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 PRPS2P11908 318 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 CRHBPP24387 322 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 UQCRC1P31930 480 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 PNLIPRP1P54315 467 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 CHRNEQ04844 493 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 NIPAL4Q0D2K0 466 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 LAPTM5Q13571 262 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 RAB41Q5JT25 222 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 KHDRBS2Q5VWX1 349 aaKnown RBP10.65□□□□□ -0.71
COPA-201ENST00000241704 MED27Q6P2C8 311 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 PIM3Q86V86 326 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 CACTIN-AS1Q8N1I8 211 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 CYP4Z2PQ8N1L4 340 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 KCNS3Q9BQ31 491 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 BRINP2Q9C0B6 783 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 AKIP1Q9NQ31 210 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 RASSF1Q9NS23 344 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 NUP50Q9UKX7 468 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 PCDHB11Q9Y5F2 797 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 LYVE1Q9Y5Y7 322 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 CROCCQ5TZA2 2017 aa10.65□□□□□ -0.71
COPA-201ENST00000241704 AGAP5A6NIR3 686 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 G3V2L1 256 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 SLC1A7O00341 560 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 PLK4O00444 970 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 HAT1O14929 419 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 SCN2BO60939 215 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms