RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Efemp2Q9WVJ9 443 aa7.43□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Dnah6E9Q0B6 4144 aa7.43□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Igkv12-46A0A140T8P6 115 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Bpifb9bA2AJD1 591 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Scgb2b7D3YYY1 112 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Gm5926E9PWJ8 236 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Vmn2r35E9Q7U8 861 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Cyp4f40G3UW81 524 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Epha3P29319 983 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Arl4aP61213 200 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Msx3P70354 204 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Dlx4P70436 240 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Emx1Q04742 257 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Top1Q04750 767 aaKnown RBP7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Prickle1Q3U5C7 832 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Mrgprx2Q3UG50 352 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Ccdc114Q3UX62 658 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Cdk15Q3V3A1 433 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Gm4952Q5FW57 296 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Spata48Q5NC83 441 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Myo1gQ5SUA5 1024 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 MarcoQ60754 518 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Tfdp2Q64163 446 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Oog2Q7TPX8 476 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Bpifb9aQ80XI7 591 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Cxcr1Q810W6 351 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Tmbim1Q8BJZ3 309 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Efemp1Q8BPB5 493 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Timmdc1Q8BUY5 285 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Stx16Q8BVI5 326 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Gpr26Q8BZA7 337 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Apoa5Q8C7G5 368 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Tldc1Q8K0P3 455 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Agfg1Q8K2K6 561 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Ccm2Q8K2Y9 453 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 St8sia6Q8K4T1 398 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Mptx1Q8R1M8 219 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Prpsap2Q8R574 369 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Med17Q8VCD5 649 aaKnown RBP7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Olfr569Q8VGZ2 314 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Rbm42Q91V81 474 aaKnown RBP7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 RabifQ91X96 123 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Pcdha10Q91Y20 946 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Msh4Q99MT2 958 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Trem2Q99NH8 227 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Q9CWU4 180 aaKnown RBP7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Dcp2Q9CYC6 422 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Q9D112 206 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Gtf2e2Q9D902 292 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Ppp1r12aQ9DBR7 1029 aaKnown RBP7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 PdclQ9DBX2 301 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Olig2Q9EQW6 323 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Dok3Q9QZK7 444 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Asb4Q9WV71 426 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Ern2Q9Z2E3 911 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Slc8a3S4R2P9 928 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Gm5538W4VSP6 401 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Tanc2A2A690 1994 aa7.42□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Ryr3A2AGL3 4863 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Notch1Q01705 2531 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Ighv3-4A0A0A6YXF1 117 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Gm45736A0A1B0GS18 427 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Bclaf3A2AG58 752 aaKnown RBP7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Tubb1A2AQ07 451 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Rsrc2A2RTL5 376 aaKnown RBP7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Dlgap4B1AZP2 992 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Zfp174B9EJW5 407 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Vmn2r118E9Q1C1 853 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Gm17067E9Q6S4 354 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Nsmce4aG3XA30 381 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Dpysl2O08553 572 aaKnown RBP7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Capn5O08688 640 aaKnown RBP7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Ercc2O08811 760 aaKnown RBP7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 AurkcO88445 282 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Dnmt3aO88508 908 aaKnown RBP7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Hoxd9P28357 339 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Traf2P39429 501 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Akr1b8P45377 316 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Cdh5P55284 784 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Gpr85P60894 370 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Cdr2P97817 455 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 CdonQ32MD9 1250 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Gdpd4Q3TT99 632 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Pld5Q3UNN8 536 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Lsmem1Q3UQS2 128 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Znf48Q3US17 591 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Znf488Q5HZG9 337 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Zscan26Q5RJ54 466 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 FntaQ61239 377 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Fkbp10Q61576 581 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Lag3Q61790 521 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Gpank1Q61858 372 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Gpalpp1Q69ZC8 346 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Zpbp2Q6X786 326 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Rps6ka6Q7TPS0 764 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Olfr1344Q7TQV3 321 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Olfr1057Q7TR75 315 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Wasf2Q8BH43 497 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Itih5Q8BJD1 952 aa7.41□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Ticam2Q8BJQ4 232 aa7.41□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms