RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 PepdQ11136 493 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Jak3Q62137 1100 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 2700097O09RikQ6PGK3 301 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Svs1Q6WIZ7 820 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Olfr1036Q7TR85 310 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Wdr37Q8CBE3 496 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 PvrQ8K094 408 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Slc38a4Q8R1S9 547 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Akr1d1Q8VCX1 325 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Olfr853Q8VGG6 305 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Uts2rQ8VIH9 385 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Slc22a7Q91WU2 540 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Dio3Q91ZI8 304 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 AmnQ99JB7 458 aaKnown RBP9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Ebna1bp2Q9D903 306 aaKnown RBP9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Esp22A8R0V4 111 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Zfp946F6VWU8 523 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm8050L7N2E3 205 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 KeraO35367 351 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Phox2bO35690 314 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Aff2O55112 1272 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Pou3f3P31361 497 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Upp1P52624 311 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 MroQ7TNB4 248 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Lats2Q7TSJ6 1042 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Cstf2Q8BIQ5 580 aaKnown RBP9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 OptcQ920A0 328 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 NplQ9DCJ9 320 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Elovl2Q9JLJ4 292 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Ect2lA0A140LIP2 953 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 IsxA1A546 240 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Tgm7A2ART8 616 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Pramef25A2ASI9 494 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Prrt4B2RU40 902 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Tas2r122D3YU55 309 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Atp6ap1lD3Z5W0 336 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Cdc25bP30306 576 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 St3gal1P54751 337 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Btbd1P58544 488 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Lhx1P63006 406 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Grb7Q03160 535 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Hp1bp3Q3TEA8 554 aaKnown RBP9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Trp53i11Q4QQM4 189 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Nxf3Q4ZGD9 553 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 B3gnt5Q8BGY6 376 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Prox2Q8BII1 593 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Ces2eQ8BK48 559 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Sfxn1Q99JR1 322 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Rassf1Q99MK9 340 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 GmfbQ9CQI3 142 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 PclafQ9CQX4 110 aaKnown RBP9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Cldnd1Q9CQX5 253 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Tmem135Q9CYV5 458 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Cst11Q9D269 139 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Ttyh1Q9D3A9 450 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Aldh6a1Q9EQ20 535 aaKnown RBP9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 FancgQ9EQR6 623 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Sars2Q9JJL8 518 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Dio2Q9Z1Y9 266 aa9.65□□□□□ -0.86
Ldlr-201ENSMUST00000034713 Gm2022A0A1Y7VLT7 144 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Znf518bB2RRE4 1077 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Zfp715G3X9T1 886 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Zfp28P10078 825 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Stt3aP46978 705 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Hhla1Q3TYV2 514 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Fzd4Q61088 537 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Spin1Q61142 262 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Lemd2Q6DVA0 511 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Osgepl1Q6PEB4 414 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Olfr699Q7TRN3 316 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Gabbr2Q80T41 940 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Rpp38Q80UU2 280 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Trim69Q80X56 500 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Gpr171Q8BG55 319 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Glt28d2Q8BML3 165 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Cstf2tQ8C7E9 632 aaKnown RBP9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 RybpQ8CCI5 228 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Zbtb6Q8K088 423 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Necab3Q9D6J4 353 aa9.65□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Tceal7A3KGA4 98 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Ankle1A8VU90 534 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Gng2P63213 71 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 PtprrQ62132 656 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Pcp4l1Q6W8Q3 68 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Gpr142Q7TQN9 365 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Serpinb9fQ80UK5 377 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Hmbox1Q8BJA3 419 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Mon1bQ8BMQ8 553 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Kcnk10Q8BUW1 535 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Q8K207 121 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Scara5Q8K299 491 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Slc29a4Q8R139 528 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Ptgr2Q8VDQ1 351 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Serpinb9gQ8VHQ1 377 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Golga7Q91W53 137 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 GlyatQ91XE0 296 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Zfp61Q923D1 555 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Unc50Q9CQ61 259 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Smurf1Q9CUN6 731 aa9.64□□□□□ -0.87
Ldlr-201ENSMUST00000034713 Rnf186Q9D241 226 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 43.7 ms