RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Ankrd12G5E893 2041 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Spin2dB1B0R2 236 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr592E9PYB3 312 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Rem1O35929 297 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Bdkrb2P32299 392 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 LdlrP35951 862 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Nrp1P97333 923 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Cacnb4Q8R0S4 519 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 PiggD3Z3Y1 983 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Ruvbl1P60122 456 aaKnown RBP13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Krt33bQ61897 404 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Stoml3Q6PE84 287 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr1472Q7TQQ9 314 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr1418Q7TQS3 318 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Stk17bQ8BG48 372 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr821Q8VG45 310 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Abcb8Q9CXJ4 717 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Alg13Q9D8C3 1166 aaKnown RBP13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Ighv11-1A0A075B5R6 117 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Aif1O70200 147 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Nr0b2Q62227 260 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Dalrd3Q6PJN8 538 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr1474Q7TQQ8 314 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Pcdhb4Q91XZ6 784 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Sytl3Q99N48 607 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gm21293E9Q4G9 266 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Aknad1E9Q8N6 675 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 H2-Q7P14429 334 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 H2-Q9P14431 200 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 UoxP25688 303 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr885Q7TRE0 309 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Calhm4Q8CE93 315 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Ephx1Q9D379 455 aa13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 RbmxQ9WV02 391 aaKnown RBP13.6□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Pabpc4lG5E8X2 370 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr618K7N6B3 318 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Svs4P18419 113 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Dlg3P70175 849 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Scamp1Q8K021 338 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gpat4Q8K2C8 456 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Isoc1Q91V64 297 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Rnf146Q9CZW6 359 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gm5538W4VSP6 401 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Prl4a1O35256 227 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Cdk5r2O35926 369 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gabrr2P56476 465 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Q504N7 393 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Tmem45aQ60774 273 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Zc3hav1lQ8BFR1 296 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Fbxw21Q8BI38 468 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Colec10Q8CF98 277 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Cers2Q924Z4 380 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Il6P08505 211 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 MaptP10637 733 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Zfp872Q3UVL3 465 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Sema5bQ60519 1093 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Ccdc36Q6PDM4 574 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr1106Q7TR57 312 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Prelid1Q8R107 217 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Uroc1Q8VC12 676 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Oas3Q8VI93 1138 aaKnown RBP13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Actr6Q9D864 396 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Prl2c5Q9JLV9 222 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Espl1P60330 2118 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Slit2Q9R1B9 1521 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gm6614M0QWR8 670 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Cyp2j5O54749 501 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Tnfsf9P41274 309 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Timm13P62075 95 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 DazlQ64368 298 aaKnown RBP13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 SrpraQ9DBG7 636 aaKnown RBP13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Actl7bQ9QY83 418 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 CasrQ9QY96 1079 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gm8159E9Q0R1 267 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Vmn1r39G3UWE6 305 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Rnpepl1G5E872 720 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Hcn3O88705 779 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 H2-Q10P01898 325 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Kcnq1P97414 668 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Slc36a2Q8BHK3 478 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Syt15Q8C6N3 418 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Hid1Q8R1F6 788 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr1099Q8VG37 312 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Sema6bO54951 886 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 GnazO70443 355 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 KcnrgQ2TUM3 264 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 HecaQ3V1N5 544 aaKnown RBP13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Tha1Q6XPS7 400 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Clec1aQ8BWY2 269 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Galnt13Q8CF93 556 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 TmieQ8K467 153 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Vmn1r228Q8R2A7 333 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Eef1e1Q9D1M4 174 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Fam136b-psA0A140T8T1 138 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gm8765B7ZWJ3 1017 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gm4181E9Q7X3 184 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 AlplP09242 524 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 PlatP11214 559 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Rps14P62264 151 aaKnown RBP13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Crisp1Q03401 244 aa13.59□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms