RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Hepacam2Q4VAH7 463 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Il20raQ6PHB0 546 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Paqr9Q6TCG2 375 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Adamtsl4Q80T21 1036 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Ckap4Q8BMK4 575 aaKnown RBP15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Asb2Q8K0L0 634 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Mtrf1Q8K126 446 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Ly6g5cQ8K1T5 149 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Olfr722Q8VFC8 308 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Pcdhga6Q91XY2 932 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Psat1Q99K85 370 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Metap1dQ9CPW9 335 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 MsraQ9D6Y7 233 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Xylt2Q9EPL0 865 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 EefsecQ9JHW4 583 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 Gpc6Q9R087 555 aa15.9■□□□□ 0.14
Shh-201ENSMUST00000002708 PcntP48725 2898 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Ccdc163A2AGD7 326 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Olfr1303A2AVW1 312 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Mgat4eA6H684 439 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Vmn1r25H3BLP0 302 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Olfr1121L7MTT1 314 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 PfklP12382 780 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Slc1a5P51912 553 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Hoxd13P70217 339 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Myadml2Q08AU7 307 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Naf1Q3UMQ8 489 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Gpalpp1Q69ZC8 346 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 C1qtnf6Q6IR41 264 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 ShbQ6PD21 503 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Olfr735Q7TRM4 354 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Fam110bQ8C739 366 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 AmotQ8VHG2 1126 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Chchd6Q91VN4 273 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 EtfdhQ921G7 616 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Gde1Q9JL56 331 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Cldn7Q9Z261 211 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Upk1bQ9Z2C6 260 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Igkv10-94A0A075B5L1 115 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 A0A286YDU1 74 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Tmem215A7E1Z1 235 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Gm4969D3YZT1 566 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Shisa8J3QNX5 399 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Socs5O54928 536 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Pabpc1P29341 636 aaKnown RBP15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Pou3f3P31361 497 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Gfi1P70338 423 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 QrfprP83861 433 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Acsm3Q3UNX5 580 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Ankrd42Q3V096 527 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Hsd3b5Q61694 373 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Atg16l2Q6KAU8 623 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Ube2r2Q6ZWZ2 238 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Tas2r39Q7TQA5 319 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Cpne3Q8BT60 533 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Ctdsp2Q8BX07 270 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Pcyox1lQ8C7K6 495 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Vmn1r214Q8R279 367 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Asb6Q91ZU1 418 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Bcl7aQ9CXE2 210 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Eml5Q8BQM8 1977 aa15.89■□□□□ 0.13
Shh-201ENSMUST00000002708 Cd300ld2A2A7W0 305 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Ttll2A4Q9E4 540 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Vmn2r3H3BJ88 915 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Gja1P23242 382 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Epb42P49222 691 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Ulk3Q3U3Q1 472 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Q3UK37 420 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Chsy3Q5DTK1 884 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 C2cd4cC2CD4Q5HZI2 419 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Cep78Q6IRU7 790 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Eme1Q8BJW7 570 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Olfm2Q8BM13 448 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 FgbQ8K0E8 481 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Sf3b4Q8QZY9 424 aaKnown RBP15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 NrmQ8VC65 262 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Pla2g15Q8VEB4 412 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Nipal2Q91WC7 383 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 NwcQ9CQI4 244 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Bbs2Q9CWF6 721 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 TsaccQ9DA44 124 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Adam21Q9JI76 729 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Rad9aQ9Z0F6 389 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Lcn5A2AJB7 192 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Ptch2O35595 1182 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Cldn2O88552 230 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 H2-AaP01910 256 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 CratP47934 626 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Entpd1P55772 510 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Nr4a2Q06219 598 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Rnf180Q3U827 592 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 D13Ertd608eQ3UPR8 151 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 QpctlQ8BH73 383 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Ptbp3Q8BHD7 523 aaKnown RBP15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Clec9aQ8BRU4 238 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Tbl3Q8C4J7 801 aaKnown RBP15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Wdr47Q8CGF6 920 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Vmn1r24Q8R2D6 296 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Kctd5Q8VC57 234 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Wdr74Q8VCG3 384 aa15.88■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms