RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 GJD4Q96KN9 370 aaPredicted RBP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 KLHL5Q96PQ7 755 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 MRPL9Q9BYD2 267 aaKnown RBP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 CD244Q9BZW8 370 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 BTBD1Q9H0C5 482 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 ZBTB20Q9HC78 741 aaPredicted RBP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 GLTPQ9NZD2 209 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 UPB1Q9UBR1 384 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 GIMAP2Q9UG22 337 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 LRFN2Q9ULH4 789 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 FZD4Q9ULV1 537 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 IRAK3Q9Y616 596 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 LAMB2P55268 1798 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 KRBOX1C9JBD0 128 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 CBX4O00257 560 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 PITPNM1O00562 1244 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 PIRO00625 290 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 PRAF2O60831 178 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 SCN2BO60939 215 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 SLC25A14O95258 325 aaPredicted RBP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 ECDO95905 644 aaPredicted RBP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 HSD3B1P14060 373 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 LMO2P25791 158 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 HSD3B2P26439 372 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 RCVRNP35243 200 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 NDUFV1P49821 464 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 SMSP52788 366 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 CRISP1P54107 249 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 CDKN2DP55273 166 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 RPS7P62081 194 aaKnown RBP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 RPA4Q13156 261 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 SCARB2Q14108 478 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 XKR6Q5GH73 641 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 ANKRD54Q6NXT1 300 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 UBE2R2Q712K3 238 aaPredicted RBP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 MIB1Q86YT6 1006 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 KRT78Q8N1N4 520 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 KIAA1958Q8N8K9 716 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 NAT16Q8N8M0 369 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 TMEM159Q96B96 161 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 HMCESQ96FZ2 354 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 NARS2Q96I59 477 aaKnown RBP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 PIP5K1AQ99755 562 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 PELOQ9BRX2 385 aaKnown RBP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 SMOC2Q9H3U7 446 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 FN3KQ9H479 309 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 ATP13A2Q9NQ11 1180 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 ITM2CQ9NQX7 267 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 KLHL1Q9NR64 748 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 TNFRSF10DQ9UBN6 386 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 NUBP2Q9Y5Y2 271 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 COL18A1P39060 1754 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 A0A0G2JPF8 293 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 LOC285095A0A1B0GVY8 99 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 HNRNPCL3B7ZW38 293 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 EIF3FO00303 357 aaPredicted RBP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 FAAHO00519 579 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 ANKRD28O15084 1053 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 KHDRBS3O75525 346 aaKnown RBP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 LRATO95237 230 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 IGSF6O95976 241 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 GLUD1P00367 558 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 ADAP00813 363 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 HNRNPCL4P0DMR1 293 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 HLA-EP13747 358 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 ITGB6P18564 788 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 DNASE1P24855 282 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 HRH2P25021 359 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 ARRB2P32121 409 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 RPIAP49247 311 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 AP1S2P56377 157 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 TAS2R43P59537 309 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 ELAVL2Q12926 359 aaKnown RBP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 BAMBIQ13145 260 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 OLIG2Q13516 323 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 AQP6Q13520 282 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 KCNC3Q14003 757 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 DSG2Q14126 1118 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 LRRC26Q2I0M4 334 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 CCDC58Q4VC31 144 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 HECTD3Q5T447 861 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 XAF1Q6GPH4 301 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 LBX2Q6XYB7 198 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 NRARPQ7Z6K4 114 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 SLC51BQ86UW2 128 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 PIM3Q86V86 326 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 TMEM192Q8IY95 271 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 DNAJC22Q8N4W6 341 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 ARRDC4Q8NCT1 418 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 ZNF548Q8NEK5 533 aaPredicted RBP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 NDRG1Q92597 394 aaKnown RBP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 GTPBP3Q969Y2 492 aaKnown RBP4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 CXorf40BQ96DE9 158 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 HRASLS5Q96KN8 279 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 C3orf30Q96M34 536 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 ZNF583Q96ND8 569 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 OR2M2Q96R28 347 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 MBOAT4Q96T53 435 aa4.87□□□□□ -1.63
HNRNPU-230ENST00000640657 COPS8Q99627 209 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms