RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 WFS1O76024 890 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 MED26O95402 600 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 ATXN8OSP0DMR3 200 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 ALDH3A1P30838 453 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 ETV4P43268 484 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 GCGRP47871 477 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 CYP4F2P78329 520 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 FOXK2Q01167 660 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 PCDH1Q08174 1060 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 GPS2Q13227 327 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 E2F2Q14209 437 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 TGIF1Q15583 401 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 TBCCQ15814 346 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 PRTGQ2VWP7 1150 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 TTMPQ5BVD1 217 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 TCTE1Q5JU00 501 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 AGBL2Q5U5Z8 902 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 ADNP2Q6IQ32 1131 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 TLDC1Q6P9B6 456 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 MYLK4Q86YV6 388 aaPredicted RBP12.6□□□□□ -0.39
GTF3A-209ENST00000640289 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.6□□□□□ -0.39
GTF3A-209ENST00000640289 CCNYL1Q8N7R7 359 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 TTC29Q8NA56 475 aaPredicted RBP12.6□□□□□ -0.39
GTF3A-209ENST00000640289 TRPC4APQ8TEL6 797 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 PPP4R1Q8TF05 950 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 FGF11Q92914 225 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 ATP6V1E2Q96A05 226 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 RERGQ96A58 199 aaPredicted RBP12.6□□□□□ -0.39
GTF3A-209ENST00000640289 CLIP3Q96DZ5 547 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 THAP11Q96EK4 314 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 L3HYPDHQ96EM0 354 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 NAF1Q96HR8 494 aaKnown RBP12.6□□□□□ -0.39
GTF3A-209ENST00000640289 EFCAB11Q9BUY7 163 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 SLC7A5P2Q9GIP4 190 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 STMN4Q9H169 189 aaPredicted RBP12.6□□□□□ -0.39
GTF3A-209ENST00000640289 EHD1Q9H4M9 534 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 ACTR8Q9H981 624 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 AKIRIN1Q9H9L7 192 aaPredicted RBP12.6□□□□□ -0.39
GTF3A-209ENST00000640289 OXSMQ9NWU1 459 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 DKK4Q9UBT3 224 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 MID2Q9UJV3 735 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 ACSL6Q9UKU0 697 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 ZNF490Q9ULM2 529 aaPredicted RBP12.6□□□□□ -0.39
GTF3A-209ENST00000640289 RUVBL1Q9Y265 456 aaKnown RBP12.6□□□□□ -0.39
GTF3A-209ENST00000640289 RNF11Q9Y3C5 154 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 ANKRD12Q6UB98 2062 aa12.6□□□□□ -0.39
GTF3A-209ENST00000640289 WDFY3Q8IZQ1 3526 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 STMND1H3BQB6 276 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 NDUFS4O43181 175 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 RAD1O60671 282 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 SERPIND1P05546 499 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 CXCR2P25025 360 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 CD82P27701 267 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 ARL1P40616 181 aaPredicted RBP12.59□□□□□ -0.39
GTF3A-209ENST00000640289 CASP2P42575 452 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 CCR10P46092 362 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 PIK3CGP48736 1102 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 CCNG1P51959 295 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 NAGLUP54802 743 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 PCBP4P57723 403 aaKnown RBP12.59□□□□□ -0.39
GTF3A-209ENST00000640289 CLCQ05315 142 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 TRAF3Q13114 568 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 GRM7Q14831 915 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 RBBP7Q16576 425 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 C1orf189Q5VU69 101 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 GRHL2Q6ISB3 625 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 LCN10Q6JVE6 187 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 RHBDD2Q6NTF9 364 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 FAM199XQ6PEV8 388 aaPredicted RBP12.59□□□□□ -0.39
GTF3A-209ENST00000640289 TMIGD1Q6UXZ0 262 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 TTLL10Q6ZVT0 673 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 VN1R5Q7Z5H4 357 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 ASPGQ86U10 573 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 DTX1Q86Y01 620 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 KRT78Q8N1N4 520 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 TBC1D19Q8N5T2 526 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 KCT2Q8NC54 265 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 SLC13A3Q8WWT9 602 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 TM4SF19Q96DZ7 209 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 CCDC126Q96EE4 140 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 PKNOX2Q96KN3 472 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 C10orf90Q96M02 699 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 SH3GL2Q99962 352 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 GSTO2Q9H4Y5 243 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 MLXIPLQ9NP71 852 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 ENAMQ9NRM1 1142 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 CUTCQ9NTM9 273 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 ZFP69BQ9UJL9 534 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 ZNF225Q9UK10 706 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 MRPS2Q9Y399 296 aaKnown RBP12.59□□□□□ -0.39
GTF3A-209ENST00000640289 AP1M2Q9Y6Q5 423 aa12.59□□□□□ -0.39
GTF3A-209ENST00000640289 NCOR2Q9Y618 2525 aa12.58□□□□□ -0.4
GTF3A-209ENST00000640289 HYKKA2RU49 373 aa12.58□□□□□ -0.4
GTF3A-209ENST00000640289 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.58□□□□□ -0.4
GTF3A-209ENST00000640289 TAF4O00268 1085 aa12.58□□□□□ -0.4
GTF3A-209ENST00000640289 PRPF4O43172 522 aaKnown RBP eCLIP12.58□□□□□ -0.4
GTF3A-209ENST00000640289 LIPCP11150 499 aa12.58□□□□□ -0.4
GTF3A-209ENST00000640289 PCNAP12004 261 aa12.58□□□□□ -0.4
GTF3A-209ENST00000640289 ALAS2P22557 587 aa12.58□□□□□ -0.4
GTF3A-209ENST00000640289 RORAP35398 523 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms