RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ETV5P41161 510 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 GNG2P59768 71 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 RAB4BP61018 213 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 RHBDD1Q8TEB9 315 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 PCDHB18PQ96TA0 734 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 OR10A4Q9H209 315 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 E9PCH4 1651 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 ATRNL1Q5VV63 1379 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 TCRBV7S2A1N4TA0A589 114 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 C8GP07360 202 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 HOXC6P09630 235 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 ENGP17813 658 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 CD72P21854 359 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 FKBP1BP68106 108 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 DPYSQ14117 519 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 TAF1AQ15573 450 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 DEFB110Q30KQ9 67 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 POTEHQ6S545 545 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 FBXL18Q96ME1 805 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 TMEM165Q9HC07 324 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 HMGXB4Q9UGU5 601 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 A0A1B0GVI7 797 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 KANTRA0A1W2PQU2 76 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 YJEFN3A6XGL0 299 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 CTHP32929 405 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 CRISP3P54108 245 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 AP3S2P59780 193 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 GRK1Q15835 563 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 ATAD3CQ5T2N8 411 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 C9orf135Q5VTT2 229 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 RELL1Q8IUW5 271 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 OSBPL11Q9BXB4 747 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 RHOJQ9H4E5 214 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 BAIAP2Q9UQB8 552 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 AIREO43918 545 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 PEPDP12955 493 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 CD83Q01151 205 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 IFI44LQ53G44 452 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 ANKRD7Q92527 254 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 MMADHCQ9H3L0 296 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 C19orf25Q9UFG5 118 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 C15orf41Q9Y2V0 281 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 HCN4Q9Y3Q4 1203 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 MAP2P11137 1827 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 LILRA4P59901 499 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 CDKAL1Q5VV42 579 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 OR2T34Q8NGX1 318 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 OR2T3Q8NH03 318 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 C17orf62Q9BQA9 187 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 PCDHB10Q9UN67 800 aa17.34■□□□□ 0.37
CACNA1A-227ENST00000636549 PTPRMP28827 1452 aa17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 ALG10BQ5I7T1 473 aa17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 RAB43Q86YS6 212 aa17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 OR5J2Q8NH18 312 aa17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 PDLIM2Q96JY6 352 aa17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 PNPLA3Q9NST1 481 aa17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 MLXQ9UH92 298 aa17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 FZD10Q9ULW2 581 aa17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 BICRALQ6AI39 1079 aa17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 C1orf52Q8N6N3 182 aaKnown RBP17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 OR9K2Q8NGE7 335 aa17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 ATOH1Q92858 354 aaPredicted RBP17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 PTCHD1Q96NR3 888 aa17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 TINAGL1Q9GZM7 467 aaPredicted RBP17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 PPP4R1LQ9P1A2 415 aa17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 DNAJB11Q9UBS4 358 aa17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 R3HDM2Q9Y2K5 976 aaKnown RBP17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 YIPF1Q9Y548 306 aa17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 PCDHB14Q9Y5E9 798 aa17.33■□□□□ 0.37
CACNA1A-227ENST00000636549 DIP2BQ9P265 1576 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 ARVCFO00192 962 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 ABLIM1O14639 778 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 IFNA21P01568 189 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 JUNDP17535 347 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 NPRL3Q12980 569 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 TIGD6Q17RP2 521 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 ABHD15Q6UXT9 468 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 CAMKVQ8NCB2 501 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 NPRL2Q8WTW4 380 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 KCNMB3Q9NPA1 279 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 STARD5Q9NSY2 213 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 AGPSO00116 658 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 ITGB8P26012 769 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 PMS2P3Q13401 168 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 ARL13AQ5H913 290 aaPredicted RBP17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 CNEP1R1Q8N9A8 125 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 SORCS1Q8WY21 1168 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 SNX27Q96L92 541 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 FAM237AA0A1B0GTK4 181 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 RCCD1A6NED2 376 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 SYN3O14994 580 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 GABRA3P34903 492 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 NSG1P42857 185 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 ARG2P78540 354 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 SLC2A7Q6PXP3 512 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 THOC6Q86W42 341 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 PCBD2Q9H0N5 130 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 CARD8Q9Y2G2 431 aa17.33■□□□□ 0.36
CACNA1A-227ENST00000636549 FAM234BA2RU67 622 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 H3BQ06 376 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms