RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 CADM3Q8N126 398 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 GHDCQ8N2G8 530 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 GPR137CQ8N3F9 429 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 GUF1Q8N442 669 aaKnown RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 ARL14EPQ8N8R7 260 aaPredicted RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 FNDC5Q8NAU1 212 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 ZNF680Q8NEM1 530 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 TSPAN14Q8NG11 270 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 CFAP61Q8NHU2 1237 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 FAM81AQ8TBF8 368 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SLC2A14Q8TDB8 520 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 TAS1R2Q8TE23 839 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 ROBO4Q8WZ75 1007 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 KCNJ9Q92806 393 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 TANKQ92844 425 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 KLHL29Q96CT2 875 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 DTD2Q96FN9 168 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 OXNAD1Q96HP4 312 aaPredicted RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 PCYT2Q99447 389 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 ASCL2Q99929 193 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SELENOSQ9BQE4 189 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 BPIFA3Q9BQP9 254 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 INPP5KQ9BT40 448 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 EFHD1Q9BUP0 239 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 MTIF3Q9H2K0 278 aaKnown RBP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 UBQLN3Q9H347 655 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 AUNIPQ9H7T9 357 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SMARCAL1Q9NZC9 954 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 OGFRQ9NZT2 677 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 ERVK-18Q9QC07 812 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 UPB1Q9UBR1 384 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 TUBGCP4Q9UGJ1 667 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 IL20RAQ9UHF4 553 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SLC7A8Q9UHI5 535 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 RSPH14Q9UHP6 348 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 SLC24A2Q9UI40 661 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 CYTH4Q9UIA0 394 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 FZD10Q9ULW2 581 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 PLCL2Q9UPR0 1127 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 NIP7Q9Y221 180 aaKnown RBP eCLIP2.84□□□□□ -1.95
PSPC1-208ENST00000635562 OSGIN2Q9Y236 505 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 MAD1L1Q9Y6D9 718 aa2.84□□□□□ -1.95
PSPC1-208ENST00000635562 FRMPD4Q14CM0 1322 aa2.84□□□□□ -1.96
PSPC1-208ENST00000635562 ANKRD30AQ9BXX3 1397 aa2.84□□□□□ -1.96
PSPC1-208ENST00000635562 FHAD1B1AJZ9 1412 aa2.84□□□□□ -1.96
PSPC1-208ENST00000635562 NACADO15069 1562 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 A0A1B0GVM2 712 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 SLC22A23A1A5C7 686 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 FAM90A8PA6NJQ4 464 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 C2CD4BA6NLJ0 364 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 YDJCA8MPS7 323 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 C12orf71A8MTZ7 269 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 TCP11X1B4DZS4 312 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 TLR4O00206 839 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 RAD51BO15315 384 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 LIASO43766 372 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 HBP1O60381 514 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 CSDE1O75534 798 aaKnown RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 WBP4O75554 376 aaKnown RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 UFL1O94874 794 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 KDM4BO94953 1096 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 AHSA1O95433 338 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 MBD3O95983 291 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 RLN1P04808 185 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 CAPN1P07384 714 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 FAM90A13PP0C7W8 464 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 FAM90A24PP0C7X0 464 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 STAG3L2P0CL84 134 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 RPA2P15927 270 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 CTPS1P17812 591 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 NCF2P19878 526 aaPredicted RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 PTNP21246 168 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 TUBG1P23258 451 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 IL32P24001 234 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 UCP1P25874 307 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 PON1P27169 355 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 HOXA9P31269 272 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 CRATP43155 626 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 SLC1A6P48664 564 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 CEBPDP49716 269 aaPredicted RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 CAMPP49913 170 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 SLC26A2P50443 739 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 SERPINH1P50454 418 aaKnown RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 CLCN5P51795 746 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 THOP1P52888 689 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 SRP54P61011 504 aaKnown RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 RAB14P61106 215 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 PSMC5P62195 406 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 PHEXP78562 749 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 S100A12P80511 92 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 HSF1Q00613 529 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 CACNG1Q06432 222 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 CALCOCO2Q13137 446 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 SLAQ13239 276 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 ITGB3BPQ13352 177 aaPredicted RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 ENPP2Q13822 863 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 PKP1Q13835 747 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 SPCS2Q15005 226 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 PDK3Q15120 406 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 USF2Q15853 346 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms