RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 CCDC187A0A096LP49 1063 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 A0A1W2PNU3 283 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 H0YIV9 168 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 MAP3K7O43318 606 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 HGFP14210 728 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 SCTRP47872 440 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 SEPHS1P49903 392 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 RPS15AP62244 130 aaKnown RBP18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 MEF2AQ02078 507 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 RTP5Q14D33 572 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 HIST2H2ACQ16777 129 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 HIST2H2AA3Q6FI13 130 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 MED27Q6P2C8 311 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 FOXR1Q6PIV2 292 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 TMIGD1Q6UXZ0 262 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 HOMEZQ8IX15 550 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 LAS2Q8IYD9 372 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 KIRREL3Q8IZU9 778 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 DNAJC22Q8N4W6 341 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 TBC1D19Q8N5T2 526 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 RCBTB1Q8NDN9 531 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 WDR36Q8NI36 951 aaKnown RBP18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 THAP11Q96EK4 314 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 C7orf26Q96N11 449 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 ZFYVE21Q9BQ24 234 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 SLC29A3Q9BZD2 475 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 SHCBP1LQ9BZQ2 653 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 ILKAPQ9H0C8 392 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 TSC22D4Q9Y3Q8 395 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 PCDHGA11Q9Y5H2 935 aa18.99■□□□□ 0.63
PDLIM2-221ENST00000622702 HGSO14964 777 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 MSL3P1P0C860 447 aa18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 MLLT3P42568 568 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 GABRA4P48169 554 aa18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 ARL4DP49703 201 aa18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 GABREP78334 506 aa18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 CYP4F3Q08477 520 aa18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 ZRSR2Q15696 482 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 CPSF6Q16630 551 aaKnown RBP eCLIP18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 ZC3H12BQ5HYM0 836 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 RAB11FIP2Q7L804 512 aa18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 PLD3Q8IV08 490 aa18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 CDYL2Q8N8U2 506 aa18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 SEC16BQ96JE7 1060 aa18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 OR2A5Q96R48 311 aa18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 POLR1BQ9H9Y6 1135 aa18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 ZNF490Q9ULM2 529 aaPredicted RBP18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 PCDHGA4Q9Y5G9 962 aa18.98■□□□□ 0.63
PDLIM2-221ENST00000622702 FEZF1A0PJY2 475 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 PMS2P1A4D2B8 440 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 AZIN1O14977 448 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 LCMT2O60294 686 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 CAPN1P07384 714 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 GSTM2P28161 218 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 AHRP35869 848 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 BCL6P41182 706 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 FOXA1P55317 472 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 EIF3IQ13347 325 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 C16orf72Q14CZ0 275 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 SH2D4BQ5SQS7 431 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 TMTC4Q5T4D3 741 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 C10orf62Q5T681 223 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 CLYBLQ8N0X4 340 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 MFSD9Q8NBP5 474 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 TTLQ8NG68 377 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 OR7G3Q8NG95 312 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 METTL6Q8TCB7 284 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 REPS1Q96D71 796 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 CNTNAP3BQ96NU0 1288 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 CNTNAP3Q9BZ76 1288 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 RHBGQ9H310 441 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 CCDC86Q9H6F5 360 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 ZDHHC2Q9UIJ5 367 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 TRAF6Q9Y4K3 522 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 MDC1Q14676 2089 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 POLR3GO15318 223 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 OR1F1O43749 312 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 UROSP10746 265 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 GYS2P54840 703 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 RBBP5Q15291 538 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 KANK2Q63ZY3 851 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 FRG2Q64ET8 278 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 ZNF781Q8N8C0 355 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 ANKRD53Q8N9V6 530 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 AGBL5Q8NDL9 886 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 WDR20Q8TBZ3 569 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 PRR11Q96HE9 360 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 FCRL4Q96PJ5 515 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 FRG2BQ96QU4 278 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 KCNA7Q96RP8 456 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 CMKLR1Q99788 373 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 SLCO1B3Q9NPD5 702 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 ZFP69BQ9UJL9 534 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 SNX6Q9UNH7 406 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 PLCL2Q9UPR0 1127 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 LOXL2Q9Y4K0 774 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 AP1M2Q9Y6Q5 423 aa18.97■□□□□ 0.63
PDLIM2-221ENST00000622702 ACACBO00763 2458 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 A0A0J9YVX5 310 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 TCP11X1B4DZS4 312 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms