RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 BOLA1Q9Y3E2 137 aa15.24■□□□□ 0.03
NPHP4-211ENST00000622020 CCNKO75909 580 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 ZNF157P51786 506 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-211ENST00000622020 WNT3P56703 355 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 IRF8Q02556 426 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 TTLL9Q3SXZ7 439 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 CBLL1Q75N03 491 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 EIF3MQ7L2H7 374 aaKnown RBP15.23■□□□□ 0.03
NPHP4-211ENST00000622020 FAM124AQ86V42 546 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 AMER2Q8N7J2 671 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 FBXO22Q8NEZ5 403 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 TSEN34Q9BSV6 310 aaKnown RBP15.23■□□□□ 0.03
NPHP4-211ENST00000622020 MMP27Q9H306 513 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 ACSL6Q9UKU0 697 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 CLDN24A6NM45 220 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 SAP18O00422 153 aaKnown RBP15.23■□□□□ 0.03
NPHP4-211ENST00000622020 SLC10A3P09131 477 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 HOXB9P17482 250 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-211ENST00000622020 BMPR1AP36894 532 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 TGM4P49221 684 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 STK19P49842 368 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-211ENST00000622020 DAB2P98082 770 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 IFITM2Q01629 132 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 SPIBQ01892 262 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 ELP6Q0PNE2 266 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 MRPL58Q14197 206 aaKnown RBP15.23■□□□□ 0.03
NPHP4-211ENST00000622020 C5orf22Q49AR2 442 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 XKR6Q5GH73 641 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 CYP4Z2PQ8N1L4 340 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 OR5AK3PQ8NH89 298 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 BCL7CQ8WUZ0 217 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-211ENST00000622020 MYLIPQ8WY64 445 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 MS4A12Q9NXJ0 267 aa15.23■□□□□ 0.03
NPHP4-211ENST00000622020 FAM227AF5H4B4 570 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 H3BM21 787 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 CYBAP13498 195 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 AOAHP28039 575 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 FLT3LGP49771 235 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 KCNJ10P78508 379 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 B4GALNT1Q00973 533 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 SMARCB1Q12824 385 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 ABRQ12979 859 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 COX20Q5RI15 118 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 ZNF605Q86T29 641 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 UBE2J2Q8N2K1 259 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 GABARAPL1Q9H0R8 117 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 EHD3Q9NZN3 535 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 MICAL3Q7RTP6 2002 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 OR2AG2A6NM03 316 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 TFECO14948 347 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-211ENST00000622020 ETHE1O95571 254 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 RPLP0P05388 317 aaKnown RBP15.22■□□□□ 0.03
NPHP4-211ENST00000622020 ADRA2AP08913 450 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 ADORA3P0DMS8 318 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 ETFAP13804 333 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 CD22P20273 847 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 PSMA3P25788 255 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 GAB1Q13480 694 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 CMTM7Q96FZ5 175 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 HRASLS5Q96KN8 279 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 C7orf34Q96L11 122 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 HOXD1Q9GZZ0 328 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 NUAK2Q9H093 628 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.22■□□□□ 0.03
NPHP4-211ENST00000622020 NEK6Q9HC98 313 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 IMPAD1Q9NX62 359 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 SPASTQ9UBP0 616 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 PSORS1C1Q9UIG5 152 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 GNG14A0A1W2PPG7 69 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 GLTPD2A6NH11 291 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-211ENST00000622020 ADAMTS4O75173 837 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 EOMESO95936 686 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 SPAM1P38567 509 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 ACSM2AQ08AH3 577 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 PPIGQ13427 754 aaKnown RBP eCLIP15.22■□□□□ 0.032e-6■■■□□ 17.1
NPHP4-211ENST00000622020 DOC2BQ14184 412 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 ACSM2BQ68CK6 577 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 OR10G2Q8NGC3 310 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 VANGL1Q8TAA9 524 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-211ENST00000622020 IPCEF1Q8WWN9 437 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-211ENST00000622020 TESCQ96BS2 214 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 SPATA17Q96L03 361 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 CTRCQ99895 268 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 TCF25Q9BQ70 676 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 CCM2Q9BSQ5 444 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 CPNE5Q9HCH3 593 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 TRPM5Q9NZQ8 1165 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 DUSP12Q9UNI6 340 aa15.22■□□□□ 0.03
NPHP4-211ENST00000622020 SMIM30A4D0T7 59 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 CLCA1A8K7I4 914 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 GABRR3A8MPY1 467 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 KIAA0513O60268 411 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 NUAK1O60285 661 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 SCN2BO60939 215 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 HLA-EP13747 358 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 GPX2P18283 190 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 FEN1P39748 380 aaKnown RBP15.21■□□□□ 0.03
NPHP4-211ENST00000622020 CASP3P42574 277 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 ITGA1P56199 1179 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms