RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 LIN28AQ9H9Z2 209 aaKnown RBP11.96□□□□□ -0.49
CIITA-212ENST00000618207 MBNL1Q9NR56 388 aaKnown RBP11.96□□□□□ -0.49
CIITA-212ENST00000618207 AASDHPPTQ9NRN7 309 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 EXD2Q9NVH0 621 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 DDX18Q9NVP1 670 aaKnown RBP11.96□□□□□ -0.49
CIITA-212ENST00000618207 NFKBIL1Q9UBC1 381 aaPredicted RBP11.96□□□□□ -0.49
CIITA-212ENST00000618207 TMED5Q9Y3A6 229 aa11.96□□□□□ -0.49
CIITA-212ENST00000618207 SOBPA7XYQ1 873 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 MYO1GB0I1T2 1018 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 G3V2T6 193 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 PCDH7O60245 1069 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 EPN2O95208 641 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 FKBP9O95302 570 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 ELK4P28324 431 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 DRD3P35462 400 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 WNT3P56703 355 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 KCNC3Q14003 757 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 FXNQ16595 210 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 PPP2R2DQ66LE6 453 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 TTC23LQ6PF05 361 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 FKBP9P1Q75LS8 142 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 CCDC80Q76M96 950 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 TMEM179BQ7Z7N9 219 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 APLFQ8IW19 511 aaPredicted RBP11.96□□□□□ -0.5
CIITA-212ENST00000618207 MMP21Q8N119 569 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 MFSD2AQ8NA29 543 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 WDR48Q8TAF3 677 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 DHRS1Q96LJ7 313 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 GORASP2Q9H8Y8 452 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 CLK4Q9HAZ1 481 aaKnown RBP11.96□□□□□ -0.5
CIITA-212ENST00000618207 SPATA6Q9NWH7 488 aaPredicted RBP11.96□□□□□ -0.5
CIITA-212ENST00000618207 SPASTQ9UBP0 616 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 RAPGEFL1Q9UHV5 662 aa11.96□□□□□ -0.5
CIITA-212ENST00000618207 RTCAO00442 366 aaKnown RBP11.95□□□□□ -0.5
CIITA-212ENST00000618207 PAPLNO95428 1278 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 CSTF3Q12996 717 aaKnown RBP11.95□□□□□ -0.5
CIITA-212ENST00000618207 EIF4HQ15056 248 aaKnown RBP11.95□□□□□ -0.5
CIITA-212ENST00000618207 DUOXA1Q1HG43 343 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 WSCD2Q2TBF2 565 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 LRIF1Q5T3J3 769 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 CPTPQ5TA50 214 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 PLD3Q8IV08 490 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 FAM20CQ8IXL6 584 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 HDDC3Q8N4P3 179 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 OR5AK3PQ8NH89 298 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 SNRNP27Q8WVK2 155 aaKnown RBP11.95□□□□□ -0.5
CIITA-212ENST00000618207 TFGQ92734 400 aaPredicted RBP11.95□□□□□ -0.5
CIITA-212ENST00000618207 SDCCAG3Q96C92 435 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 DTNBP1Q96EV8 351 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 TPD52L3Q96J77 140 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 MYADMQ96S97 322 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 ZDHHC5Q9C0B5 715 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 FZD3Q9NPG1 666 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 STON1Q9Y6Q2 735 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 SDK1Q7Z5N4 2213 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 KIAA1549LQ6ZVL6 1849 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 PIPSLA2A3N6 862 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 H0YIV9 168 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 VILLO15195 856 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 HS6ST1O60243 411 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 EEF1B2P24534 225 aaKnown RBP11.95□□□□□ -0.5
CIITA-212ENST00000618207 POLR2IP36954 125 aaKnown RBP11.95□□□□□ -0.5
CIITA-212ENST00000618207 CAPGP40121 348 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 TPD52P55327 224 aaPredicted RBP11.95□□□□□ -0.5
CIITA-212ENST00000618207 ERVK-21P61565 698 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 APOFQ13790 326 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 PIP5KL1Q5T9C9 394 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 ATG9BQ674R7 924 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 XKR5Q6UX68 686 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 RNF165Q6ZSG1 346 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 C11orf96Q7Z7L8 435 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 GALNT5Q7Z7M9 940 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 AMZ2Q86W34 360 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 RASGRP3Q8IV61 690 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 TNIP2Q8NFZ5 429 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 CIDECQ96AQ7 238 aaPredicted RBP11.95□□□□□ -0.5
CIITA-212ENST00000618207 MCOLN1Q9GZU1 580 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 CCDC177Q9NQR7 707 aaPredicted RBP11.95□□□□□ -0.5
CIITA-212ENST00000618207 DCAF13Q9NV06 445 aaKnown RBP11.95□□□□□ -0.5
CIITA-212ENST00000618207 TAC3Q9UHF0 121 aa11.95□□□□□ -0.5
CIITA-212ENST00000618207 A0A0G2JN53 185 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 FEZF1A0PJY2 475 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 SCN2BO60939 215 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 SCELO95171 688 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 KLK1P06870 262 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 PNLIPRP1P54315 467 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 NR1H2P55055 460 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 TAS2R38P59533 333 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 ZNF385BQ569K4 471 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 ZNF852Q6ZMS4 543 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 COMMD6Q7Z4G1 85 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 DSG4Q86SJ6 1040 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 PACRGLQ8N7B6 248 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 DNAJC5GQ8N7S2 189 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 HCAR2Q8TDS4 363 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 TPT1P8Q9HAU6 139 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 ACSL6Q9UKU0 697 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 MAN2B2Q9Y2E5 1009 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 UGDHO60701 494 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 OPN1SWP03999 348 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms