RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 CHAF1BQ13112 559 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 NAE1Q13564 534 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 IL10RAQ13651 578 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 GRB7Q14451 532 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 CYP2A13Q16696 494 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 NADK2Q4G0N4 442 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 HHATQ5VTY9 493 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 HIST2H2BCQ6DN03 193 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 KMT5CQ86Y97 462 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 SLC22A9Q8IVM8 553 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 PTGR2Q8N8N7 351 aaPredicted RBP14.25□□□□□ -0.13
UBXN1-218ENST00000616865 PPFIBP2Q8ND30 876 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 ZNF480Q8WV37 535 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 SLC22A18Q96BI1 424 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 CCDC126Q96EE4 140 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 PHF21BQ96EK2 531 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 CD180Q99467 661 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 MAP3K3Q99759 626 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 PAIP2Q9BPZ3 127 aaKnown RBP14.25□□□□□ -0.13
UBXN1-218ENST00000616865 SLC25A23Q9BV35 468 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 ATG10Q9H0Y0 220 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 C12orf65Q9H3J6 166 aaKnown RBP14.25□□□□□ -0.13
UBXN1-218ENST00000616865 MLXIPLQ9NP71 852 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 CCDC177Q9NQR7 707 aaPredicted RBP14.25□□□□□ -0.13
UBXN1-218ENST00000616865 FGF21Q9NSA1 209 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 SLC17A7Q9P2U7 560 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 EMCNQ9ULC0 261 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 ANGPTL3Q9Y5C1 460 aa14.25□□□□□ -0.13
UBXN1-218ENST00000616865 TMEM120BA0PK00 339 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 OR5K3A6NET4 321 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 TLCD2A6NGC4 264 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 ARGFXA6NJG6 315 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 MATN2O00339 956 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 TYROBPO43914 113 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 CCNT2O60583 730 aaKnown RBP14.24□□□□□ -0.13
UBXN1-218ENST00000616865 IPO13O94829 963 aaKnown RBP14.24□□□□□ -0.13
UBXN1-218ENST00000616865 HSPA7P48741 367 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 ARL4DP49703 201 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 ALDH18A1P54886 795 aaKnown RBP14.24□□□□□ -0.13
UBXN1-218ENST00000616865 RPS15P62841 145 aaKnown RBP14.24□□□□□ -0.13
UBXN1-218ENST00000616865 ASPHQ12797 758 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 KIR2DS3Q14952 304 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 CAPN13Q6MZZ7 669 aaPredicted RBP14.24□□□□□ -0.13
UBXN1-218ENST00000616865 SUSD1Q6UWL2 747 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 ZYG11AQ6WRX3 759 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 SNX31Q8N9S9 440 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 LMNTD1Q8N9Z9 388 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 PDPRQ8NCN5 879 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 DENND1AQ8TEH3 1009 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 SSC4DQ8WTU2 575 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 RHBDF1Q96CC6 855 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 ACSS2Q9NR19 701 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 ACTR10Q9NZ32 417 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 MAP4K5Q9Y4K4 846 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 TNPO3Q9Y5L0 923 aaKnown RBP14.24□□□□□ -0.13
UBXN1-218ENST00000616865 SHANK1Q9Y566 2161 aa14.24□□□□□ -0.13
UBXN1-218ENST00000616865 SPTAN1Q13813 2472 aaKnown RBP14.24□□□□□ -0.13
UBXN1-218ENST00000616865 BTN3A3O00478 584 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 SCRG1O75711 98 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 STK16O75716 305 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 WDR47O94967 919 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 CCNDBP1O95273 360 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 ERGP11308 486 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 TBPL1P62380 186 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 HSD11B2P80365 405 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 FASTKQ14296 549 aaKnown RBP14.23□□□□□ -0.13
UBXN1-218ENST00000616865 SETDB1Q15047 1291 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 SF1Q15637 639 aaKnown RBP14.23□□□□□ -0.13
UBXN1-218ENST00000616865 ZNF517Q6ZMY9 492 aaPredicted RBP14.23□□□□□ -0.13
UBXN1-218ENST00000616865 TMEM126BQ8IUX1 230 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 ADGRF3Q8IZF5 1079 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 D2HGDHQ8N465 521 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 PPP1R14CQ8TAE6 165 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 HMGCLL1Q8TB92 370 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 MGARPQ8TDB4 240 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 PPP4R1Q8TF05 950 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 PYCR2Q96C36 320 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 NRTNQ99748 197 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 ACAT2Q9BWD1 397 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 PCBD2Q9H0N5 130 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 ING2Q9H160 280 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 OPTCQ9UBM4 332 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 PTBP2Q9UKA9 531 aaKnown RBP14.23□□□□□ -0.13
UBXN1-218ENST00000616865 DYRK1BQ9Y463 629 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 ICE1Q9Y2F5 2266 aa14.23□□□□□ -0.13
UBXN1-218ENST00000616865 A8MT66 165 aa14.22□□□□□ -0.13
UBXN1-218ENST00000616865 E7ENX8 843 aa14.22□□□□□ -0.13
UBXN1-218ENST00000616865 DLX3O60479 287 aa14.22□□□□□ -0.13
UBXN1-218ENST00000616865 MTHFD2P13995 350 aa14.22□□□□□ -0.13
UBXN1-218ENST00000616865 EEF1DP29692 281 aaKnown RBP14.22□□□□□ -0.13
UBXN1-218ENST00000616865 CMPK1P30085 196 aa14.22□□□□□ -0.13
UBXN1-218ENST00000616865 CCL11P51671 97 aa14.22□□□□□ -0.13
UBXN1-218ENST00000616865 PPP2R2AP63151 447 aa14.22□□□□□ -0.13
UBXN1-218ENST00000616865 TAP2Q03519 686 aa14.22□□□□□ -0.13
UBXN1-218ENST00000616865 C18orf21Q32NC0 220 aaPredicted RBP14.22□□□□□ -0.13
UBXN1-218ENST00000616865 PTCHD3Q3KNS1 767 aa14.22□□□□□ -0.13
UBXN1-218ENST00000616865 FBXO48Q5FWF7 155 aa14.22□□□□□ -0.13
UBXN1-218ENST00000616865 CFAP157Q5JU67 520 aa14.22□□□□□ -0.13
UBXN1-218ENST00000616865 PRAMEF13Q5VWM6 474 aa14.22□□□□□ -0.13
UBXN1-218ENST00000616865 THOC6Q86W42 341 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms