RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 ZNF554Q86TJ5 538 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 LILRA3Q8N6C8 439 aaPredicted RBP16.63■□□□□ 0.25
NEK3-206ENST00000611833 FAR1Q8WVX9 515 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 TRUB1Q8WWH5 349 aaKnown RBP16.63■□□□□ 0.25
NEK3-206ENST00000611833 MYOCQ99972 504 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 RAD18Q9NS91 495 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 DNAAF2Q9NVR5 837 aaKnown RBP16.63■□□□□ 0.25
NEK3-206ENST00000611833 NUP214P35658 2090 aaPredicted RBP16.63■□□□□ 0.25
NEK3-206ENST00000611833 MGAT4DA6NG13 374 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 GABRR3A8MPY1 467 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 ATG13O75143 517 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 JRKO75564 520 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 ETHE1O95571 254 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 HSD3B1P14060 373 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 TIMP2P16035 220 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 POLR2EP19388 210 aaKnown RBP16.63■□□□□ 0.25
NEK3-206ENST00000611833 HSD3B2P26439 372 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 CTSCP53634 463 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 VEZF1Q14119 521 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 NR1D2Q14995 579 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 POM121L1PQ3SYA9 428 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 OTOP2Q7RTS6 562 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 RASGEF1AQ8N9B8 481 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 GPR156Q8NFN8 814 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 MRGPRX3Q96LB0 322 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 BRF2Q9HAW0 419 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 PCDHGB1Q9Y5G3 927 aa16.63■□□□□ 0.25
NEK3-206ENST00000611833 GNG14A0A1W2PPG7 69 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 HIDE1A8MVS5 230 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 FSHRP23945 695 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 NNMTP40261 264 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 C21orf58P58505 322 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 ERVFC1P60507 584 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 DMC1Q14565 340 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 ACOX1Q15067 660 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 LDLRAP1Q5SW96 308 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 ADNP2Q6IQ32 1131 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 CCDC81Q6ZN84 652 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 SYNPOQ8N3V7 929 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 BTN2A2Q8WVV5 523 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 COX4I2Q96KJ9 171 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 FOPNLQ96NB1 174 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 OR4K3Q96R72 315 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 PALMDQ9NP74 551 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 IRAK4Q9NWZ3 460 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 THUMPD1Q9NXG2 353 aaKnown RBP16.62■□□□□ 0.25
NEK3-206ENST00000611833 HCFC2Q9Y5Z7 792 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 SLC16A8O95907 504 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 NTRK1P04629 796 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 NUDT7P0C024 238 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 JUNDP17535 347 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 PBLDP30039 288 aaPredicted RBP16.62■□□□□ 0.25
NEK3-206ENST00000611833 HPCAL1P37235 193 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 MAP2K4P45985 399 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 MLLT10P55197 1068 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 ITGA1P56199 1179 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 CXCR4P61073 352 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 RAE1P78406 368 aaKnown RBP16.62■□□□□ 0.25
NEK3-206ENST00000611833 CTF1Q16619 201 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 ANXA8L1Q5VT79 327 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 GPR155Q7Z3F1 870 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 ZNF540Q8NDQ6 660 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 ABHD11Q8NFV4 315 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 OR7G3Q8NG95 312 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 GLMNQ92990 594 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 METTL2AQ96IZ6 378 aaKnown RBP16.62■□□□□ 0.25
NEK3-206ENST00000611833 PKP4Q99569 1192 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 TCF25Q9BQ70 676 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 SH3BP4Q9P0V3 963 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 CORO2BQ9UQ03 480 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 CORINQ9Y5Q5 1042 aa16.62■□□□□ 0.25
NEK3-206ENST00000611833 TRIM43BA6NCK2 446 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 SUV39H1O43463 412 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 CBFA2T3O75081 653 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 PPIBP23284 216 aaKnown RBP16.61■□□□□ 0.25
NEK3-206ENST00000611833 IMPA1P29218 277 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 AQP1P29972 269 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 RAB15P59190 212 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 OCA2Q04671 838 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 KIAA1614Q5VZ46 1190 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 ANGPTL8Q6UXH0 198 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 KIAA0907Q7Z7F0 614 aaPredicted RBP16.61■□□□□ 0.25
NEK3-206ENST00000611833 NPAS3Q8IXF0 933 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 HUS1BQ8NHY5 278 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 TRIM43Q96BQ3 446 aaPredicted RBP16.61■□□□□ 0.25
NEK3-206ENST00000611833 C11orf24Q96F05 449 aaPredicted RBP16.61■□□□□ 0.25
NEK3-206ENST00000611833 CCM2Q9BSQ5 444 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 SPATA9Q9BWV2 254 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 DUSP21Q9H596 190 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 RUBCNLQ9H714 662 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 ADPRHL2Q9NX46 363 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 BTNL2Q9UIR0 455 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 NDRG4Q9ULP0 352 aaKnown RBP16.61■□□□□ 0.25
NEK3-206ENST00000611833 PCDHGA10Q9Y5H3 936 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 WNT6Q9Y6F9 365 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 TSPAN11A1L157 253 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 FAM20BO75063 409 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 C9P02748 559 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 ABCB1P08183 1280 aaPredicted RBP16.61■□□□□ 0.25
NEK3-206ENST00000611833 OCM2P0CE71 109 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms